Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001357.1 Length=7857 Score E Sequences producing significant alignments: (Bits) Value seq8046 251 4e-63 >seq8046 Length=7925 Score = 251 bits (278), Expect = 4e-63 Identities = 664/1003 (66%), Gaps = 38/1003 (4%) Strand=Plus/Plus Query 5844 CCTGACCCAAATAAATTTGGTTTACCTGATACTAGTATTTATAATCCTGAAACACAACGT 5903 || ||||| ||||| |||||| | |||||| | | | ||| |||| || || || ||| Sbjct 70 CCGGACCCCAATAAGTTTGGTCTGCCTGATGCCAACCTCTATGATCCCGACACCCAGCGT 129 Query 5904 TTAGTGTGGGCCTGTGCTGGAGTGGAAATTGGCCGTGGTCAGCCTTTAGGTGTTGGCCTT 5963 | |||||||||||| ||||| || | || ||||| |||||| | ||||| || | Sbjct 130 CTGCTGTGGGCCTGTGTCGGAGTTGAGGTGGGTCGTGGCCAGCCTCTGGGTGTGGGGATA 189 Query 5964 AGTGGGCATCCATTTTATAATAAATTAGATGACACTGAAAGTTCCCA---TGCCGCCACG 6020 || || || | ||||| | | | ||||| ||||||| | | || | ||| ||| Sbjct 190 TCCGGTCACCCTTACTATAACAGACTGGATGATACTGAAAATGCACACAATCCCGACACA 249 Query 6021 TCTAATGTTTCTGAGGACGTTAGGGACAATGTGTCTGTAGATTATAAGCAGACACAGTTA 6080 || ||| | ||| |||| ||| | || | |||||||| ||||||||| | Sbjct 250 GCTGATGATG----GGA-----GGGAGAATATATCCATGGATTATAAACAGACACAGCTG 300 Query 6081 TGTATTTTGGGCTGTGCCCCTGCTATTGGGGAACACTGGGCTAAAGGCACTGCTTGTAAA 6140 | ||||||||| || ||| |||| || ||||| ||| | || |||||| | || | Sbjct 301 TTTATTTTGGGATGCAAGCCTCCTATAGGTGAACATTGGTCCAAGGGCACTACCTGCAG- 359 Query 6141 TCGCGTCCTTTATCACAGGGCGATTGCCC--CCCTTTAGAACTTAAAAACACAGTTTTGG 6198 || ||| | | | || || || || ||||| || ||| |||||| | | | Sbjct 360 -CGGGTCATCTG-CTGTTGGTGACTGTCCTCCCCTTCAGT--TTACAAACACCACTATTG 415 Query 6199 AAGATGGTGATATGGTAGATACTGGATATGGTGCCATGGACTTTAGTACATTGCAAGATA 6258 | ||||| |||||||| || || || | || ||| |||| ||| | | || | Sbjct 416 AGGATGGGGATATGGTTGAAACCGGGTTCGGGGCCCTGGATTTTGCCGCTCTACAGTCCA 475 Query 6259 CTAAATGTGAGGTACCATTGGATATTTGTCAGTCTATTTGTAAATATCCTGATTATTTAC 6318 |||| ||| || || ||||||||||| || ||||||||||| || ||| | Sbjct 476 ACAAATCTGATGTCCCCCTGGATATTTGTACTAACATATGTAAATATCCGGACTATCTGA 535 Query 6319 AAATGTCTGCAGATCCTTATGGGGATTCCATGtttttttGCTTACGGCGTGAGCAGCTTT 6378 ||||| |||| || || ||||| ||||| ||||| |||| | | || | |||||| | | Sbjct 536 AAATGGCTGCTGACCCCTATGGCGATTCTATGTTCTTTTCCCTGCGCAGGGAGCAGATGT 595 Query 6379 TTGCTAGGCATTTTTGGAATAGAGCAGGTACTATGGGTGACACTGTGCCTCAATCCTTAT 6438 | | ||||||||| ||| | | || | ||||||||| | | || | ||| Sbjct 596 TCACCCGGCATTTTTTTAATCGGGGTGGGTCGATGGGTGACGCCCTCCCGGAGGAGCTAT 655 Query 6439 ATATTAAAGGCACAGGTATGCCTGC--TTCACCTGGCAGCTGTGTGTATTCTCCCTCTCC 6496 || | ||| || | | || | | || || || | ||| || | || |||| Sbjct 656 ATGTCAAA-----AGTTCTACCGTCCAGACCCCCGGTAGTTATGTTTACACCTCCACTCC 710 Query 6497 AAGTGGCTCTATTGTTACCTCTGACTCCCAGTTGTTTAATAAACCATATTGGTTACATAA 6556 ||||||||||| || ||||||| ||||| ||||| || || || ||| | | | Sbjct 711 CAGTGGCTCTATGGTATCCTCTGAACAGCAGTTATTTAACAAGCCTTACTGGCTGCGAAG 770 Query 6557 GGCACAGGGTCATAACAATGGTGTTTGCTGGCATAATCAATTATTTGTTACTGTGGTAGA 6616 ||| ||||| ||||||||||| | |||||| |||| | || | || ||||| || Sbjct 771 GGCCCAGGGACATAACAATGGCATGTGCTGGGGCAATCGGGTCTTCCTGACAGTGGTGGA 830 Query 6617 TACCACTCCCAGTACCAATTTAACAATATGTGC--TTCTACACAGTCTCCTGTACCTGGG 6674 ||||| | ||| || ||| | | | ||||| | || ||| | | | || Sbjct 831 CACCACGCGCAGCACAAATGTCTCTTTGTGTGCCACTGTAAACA-----CAGAAACT--- 882 Query 6675 CAATATGATGCTACCAAATTTAAGCAGTATAGCAGACATGTTGAGGAATATGATTTGCAG 6734 | ||| | || |||| | |||| | || || ||| | ||||| |||||||||||| Sbjct 883 AATTATAAGGCCTCCAATTATAAGGAATACCTTAGGCATATGGAGGAGTATGATTTGCAG 942 Query 6735 TTTATTTTTCAGTTGTGTACTATTACTTTAACTGCAGATGTTATGTCCTATATTCATAGT 6794 || |||||||| |||| | || || | || | || | ||| | || || |||| Sbjct 943 TTCATTTTTCAACTGTGCAAAATAACACTTACCCCCGAGATAATGGCATACATACATAAC 1002 Query 6795 ATGAAT-AGCAGTATTTTAGAGGATTGGAACTTTGGTGTTCCC 6836 ||| || || || | | ||||| |||||||||||||| ||| Sbjct 1003 ATGGATGCGCGGT-TGCTTGAGGACTGGAACTTTGGTGTACCC 1044 Score = 205 bits (226), Expect = 5e-49 Identities = 679/1057 (64%), Gaps = 9/1057 (1%) Strand=Plus/Plus Query 1846 TATGTTAATTCAACCACCAAAATTGCGAAGTAGTGTTGCAGCACTATATTGGTATAGAAC 1905 |||| | || ||||||||||| | |||||| ||| || | || ||||| | || Sbjct 3651 TATGCTCATAGAACCACCAAAACTAAGAAGTACACCTGCTGCCTTGTACTGGTACAAGAC 3710 Query 1906 AGGAATATCAAATATTAGTGAAGTA-ATGGGAGACACACCTGAGTGGATACAAAGACTTA 1964 | || ||| ||||| || ||||| || ||||| || |||||| |||| | Sbjct 3711 ATCCATGGGTAATGGGAGTGAGGTCTATGGG-GAGACACCAGAATGGATAGTGAGACAGA 3769 Query 1965 CTATTATACAACATGGAATAGATGAT-AGCAATTTTGATTTGTCAGAAATGGTACAATGG 2023 | | ||| ||| | || || ||| |||| || ||| || | ||||| || | Sbjct 3770 CACTGATAGGACACAGTATGGAGGATGAGCAGTTCAAATTA-TCTGTCATGGTGCAGTAC 3828 Query 2024 GCATTTGATAATGAGCTGACAGATGAAAGCGATATGGCATTTGAATATGCCTTATTAGCA 2083 |||| ||| |||| | || || || |||| |||||||||| || || | || Sbjct 3829 GCATATGACCATGACATAACGGACGAGAGCGCACTGGCATTTGAGTACGCACAGCTGGCG 3888 Query 2084 GACAGCAACAGCAATGCAGCTGCCTTTTTAAAAAGCAATTGCCAAGCTAAATATTTAAAA 2143 ||| || |||||| || || ||| |||| ||||| ||||| || || || ||||| Sbjct 3889 GACGTGGACGCCAATGCGGCAGCATTTCTAAACAGCAACTGCCAGGCCAAGTACCTAAAA 3948 Query 2144 GATTGTGCCACAATGTGCAAACATTATAGGCGAGCCCAAAAACGACAAATGAATATGTCA 2203 || | |||||||||| ||| || | ||| || | | |||||||| |||| Sbjct 3949 GACGCGGTGACAATGTGCAGACACTACAAGCGTGCAGAGAGGGAACAAATGAGTATGAGC 4008 Query 2204 CAGTGGATACGATTTAGATGTTCAAAAATAGATGAAGGGGGAGATTGGAGACCAATAGTG 2263 |||||||| ||||||| | || ||| || | |||||||||| || ||||| Sbjct 4009 CAGTGGATCAAATTTAGAGGGAGCAAGATATCAGAGGAAGGAGATTGGAAGCCTATAGTA 4068 Query 2264 CAATTCCTGCGATACCAACAAATAGAGTTTATAACATTTTTAGGAGCCTTAAAATCANNN 2323 | || | | | || ||||||| | |||| | | ||||| || ||| Sbjct 4069 AAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTGTCATTCCTTGCTGCCTTTAAGTCATTT 4128 Query 2324 NNNNNNNNNNNNNNNNNNNNNNNNNGTTTAGTATTTTGTGGACCAGCAAATACAGGAAAA 2383 | |||| |||| |||||| ||| ||||||| ||| Sbjct 4129 TTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGCAGATACAGGCAAA 4188 Query 2384 TCATATTTTGGAATGAGTTTTATACACTTTATACAAGGAGCAGTAATATCATTTGTGAAT 2443 |||||||| | |||||| || | || || || || || |||||||||| || ||| Sbjct 4189 TCATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATATCATATGCCAAT 4248 Query 2444 TCCACTAGTCATTTTTGGTTGGAACCGTTAACAGATACTAAGGTGGCCATGTTAGATGAT 2503 |||| ||| || |||||| || | || ||| | || | |||| | | | | || ||| Sbjct 4249 TCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGACTACTGGACGAT 4308 Query 2504 GCAACGACCACGTGTTGGACATACTTTGATACCTATATGAGAAATGCGTTAGATGGCAAT 2563 || ||| || ||| ||||| || ||||||| ||| | || || ||||||| || Sbjct 4309 GCGACGGCCCAGTGCTGGACGTATATTGATACATATCTTAGGAACCTACTAGATGGAAAC 4368 Query 2564 CCAATAAGTATTGATAGAAAGCACAAACCATTAATACAACTAAAATGTCCTCCAATACTA 2623 || | ||||| || || || || || | | | || |||||||||||||| || | Sbjct 4369 CCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGCAGATAAAATGTCCTCCATTAATG 4428 Query 2624 CTAACCACAAATATACATCCAGCAAAGGATAATAGATGGCCATATTTAGAAAGTAGAATA 2683 |||| || || ||| |||| | |||| | |||||| ||||| || ||| || Sbjct 4429 ATAACAACCAACATAAATCCTCTAGAGGAGGACAGATGGAAGTATTTGCGCAGCAGAGTA 4488 Query 2684 ACAGTATTTGAATTTCCAAATGCATTTCCATTTGATAAAAATGGCAATCCAGTATATGAA 2743 ||| | ||| | ||| | || ||||||| || | | || | || |||| Sbjct 4489 ACACTGTTTAAGTTTACCAACCCATTTCCCTTCGCAAGCCCAGGGGAGCCCCTATACCCT 4548 Query 2744 ATAAATGACAAAAATTGGAAATGtttttttGAAAGGACATGGTCCAGATTAGATTTGCAC 2803 |||||| | ||| |||||||| ||||| ||||| | |||||| | |||| | || Sbjct 4549 ATAAATAATGCAAACTGGAAATGCTTTTTCCAAAGGTCGTGGTCCCGCCTAGACCTAAAC 4608 Query 2804 GAGGAAGAGGAAGATGCAGACACCGAAGGAAACCCTTTCGGAACGTTTAAGTTGCGTG-C 2862 |||||| | | ||||| | |||||| || || ||||| || |||||| | Sbjct 4609 AGTCCAGAGGATCAGGAAGACA---ATGGAAACACTGGCGAGCCGTTT-AGATGCGTGCC 4664 Query 2863 AGGACAAAATCATAGACCACTATGAAAATGACAGTAA 2899 |||| | | |||| | |||||||| || || || Sbjct 4665 AGGAGACGTTGCTAGAACTGTATGAAAAAGATAGCAA 4701 Score = 199 bits (220), Expect = 2e-47 Identities = 622/963 (65%), Gaps = 32/963 (3%) Strand=Plus/Plus Query 4286 ACTGACTTATATAAAACATGTAAACAATCTGGTACATGTCCACCTGATGTTGTTCCTAAG 4345 || ||||||||| |||||| || || |||| || || || |||||| | | |||| | Sbjct 6348 ACGGACTTATATCGAACATGCAAGCAGGCTGGAACGTGCCCCCCTGATATCATACCTAGG 6407 Query 4346 GTGGAGGGCACCACGTTAGCAGATAAAATATTGCAATGGTCAAGCCTTGGTATATTTTTG 4405 ||||| ||| ||||| |||| |||| | ||||| ||||| || | ||||| Sbjct 6408 GTGGAACAGGACACATTAGCTGATAGAATACTAAAATGGGGCAGCCTAGGGGTCTTTTTC 6467 Query 4406 GGTGGACTTGGCATAGGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATTCCATTG 4465 ||||| || || |||||||| ||||| || Sbjct 6468 GGTGGCCTCGGTATAGGTACTGGAAGCGGCACTGGGGGACGCACAGGCTACATACC---- 6523 Query 4466 GGTGGGCGTT---CCAATA-CAGTGGTGGATGTTGGTC---CTACACGTCCCCCAGTGGT 4518 ||||||| |||| | | || || ||||| || | | || | || || | || Sbjct 6524 GGTGGGCACCAGACCAACAACTGTCGTTGATGTAGGACTGGCGCCAAGGCCACCTATAGT 6583 Query 4519 TATTGAACCTGTGGGCCCCACAGACCCATCTATTGTTACATTAATAGAGGACTCCAGTGT 4578 |||||||||||||| | | || ||||||||||||| ||| | ||||| ||||| | Sbjct 6584 AATTGAACCTGTGGGGGCGTCCGAACCATCTATTGTTAATTTAGTGGAGGATTCCAGCAT 6643 Query 4579 GGTTACATCAGGTGCACCTAGGCCTACGTTTACTGGCACGTCTGGGTTTGA---TATAAC 4635 ||| | ||| | || || || ||||| ||||| ||||||||| || || Sbjct 6644 CATTAATGCTGGTTCCTCTCATCCCACCTTTACCGGCACTGGTGGGTTTGAGGTTACCAC 6703 Query 4636 ATCTGCGGGTACAACTACACCTGCGGTTTTGGATATCACACCTTCGTCTACCTCTGTGTC 4695 ||| ||| || || ||||| || |||| ||||| |||||| || ||| Sbjct 6704 ATCCACGGTGACTG--AC-CCTGCAGTCCTGGACATCACTCCTTCGGGTAATGGGGTGCA 6760 Query 4696 TATTTCCACAACCAATTTTACCAATCCTGCATTTTCTGATCCGTCCATTATTGAAGTTCC 4755 || || | | ||| |||||| || |||| || | |||||||| | ||| Sbjct 6761 GGTTAGCAGCAGTAGCTTTGTGAATCCTCTCTTCACTGACCCTGCTATTATTGAGGCTCC 6820 Query 4756 ACAAACTGGGGAGGTGGCAGGTAATGTATTTGTTGGTACCCCTACATCTGGAACACATGG 4815 |||||||||||||| |||| |||| ||||| | || | ||||| || | || || Sbjct 6821 TCAAACTGGGGAGGTTACAGGGCATGTGCTTGTTAGCACTGCCACATCAGGGTCCCACGG 6880 Query 4816 GTATGAGGAAATACCTTTACAAACATTTGCTTCTTCTGGTACGG-GGGAG--GAACCCAT 4872 | ||||||||||| | || || || || | |||||| || |||| || ||||| Sbjct 6881 CTTCGAGGAAATACCAATGCAGACCTTCGCGACCTCTGGTGGGGATGGAGGAGAGCCCAT 6940 Query 4873 TAGTAGTACCCCATTGCCTACTGTGCGGCGTGTAGCAGGTCCCCGCCTTTACAGTAGGGC 4932 ||||| || || | ||| ||||| | || || || ||||||||||| |||||||| Sbjct 6941 AAGTAGCACTCCTGTCCCTGGCGTGCGCAGGGTTGCTGGGCCCCGCCTTTATAGTAGGGC 7000 Query 4933 CTACCAACAAGTGTCAGTGGCTAACCCTGAGTTTCTTACACGTCCATCCTCTTTAATTAC 4992 | | || || ||| || |||||| ||| || |||||| | ||| | || Sbjct 7001 CAATCAGCAGGTGCGGGTATGGGACCCTGCCTTTATTGAACGTCCTGCAGATTTGGTGAC 7060 Query 4993 ATATGACAACCCGGCCTTTGAGCCTGTGGACACTACATTAACATTTGATCCTCGTAG--- 5049 || ||||||||| | || ||| || | ||| |||| ||| |||| | | || | Sbjct 7061 ATTTGACAACCCTGTCTATGACCCCGAGGAAACTA---TAATATTTCAGCATCCAGGCTT 7117 Query 5050 ---TGATGTTCCTGATTCAGATTTTATGGATATTATCCGTCTACATAGGCCTGCTTTAAC 5106 ||| || || | || || |||| || | || || | ||||| | || Sbjct 7118 GCATGAGCCACCGGACCCTGACTTCCTGGACATAGTGTCACTGCACCGCCCTGCCCTCAC 7177 Query 5107 ATCCA---GGCGTGGGACTGTTCGCTTTAGTAGATTAGGTCAACGGGCAACTATGTTTAC 5163 |||| ||| || ||||| ||||| ||| | || || | ||||| || | || Sbjct 7178 GTCCACCCGGCAGGGTACTGTCCGCTTCAGTCGGTTGGGACGCCGGGCCACGCTTCGCAC 7237 Query 5164 CCGCAGCGGTACACAAATAGGTGCTAGGGTTCACTTTTATCATGATATAAGTCCTATTGC 5223 || || |||| |||||| || |||||||| ||||| ||||||||||| || ||| | || Sbjct 7238 GCGTAGTGGTAAACAAATTGGGGCTAGGGTACACTTCTATCATGATATCAGCCCTGTCGC 7297 Query 5224 ACC 5226 || Sbjct 7298 TCC 7300 Score = 100 bits (110), Expect = 1e-17 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 5576 CCTAAGAAACGTAAACGTGTTCCCTAtttttttGCAGATGGCTTTGTGGCGGCCTAGTGA 5635 ||||| |||||||||||| | |||||| ||||||||||||| |||||||||||| ||| Sbjct 7650 CCTAAACGACGTAAACGTGTGCACTATTTCTTTGCAGATGGCTATGTGGCGGCCTAATGA 7709 Query 5636 CAATACCGTATATCTTCCACCTCCTTCTGTGGCAAGAGTTGTAAATACCGATGATTATGT 5695 | | ||||| || || || | |||| ||| || | | ||| |||| ||||| Sbjct 7710 AAGCAAGGTATACCTGCCTCCAACACCTGTCTCAAAGGTGCTCAGTACGGATGTCTATGT 7769 Query 5696 GACTCCCACAAGCATATTTTATCATGCTGGCAGCTCTAGATTATTAACTGTTGGTAATCC 5755 || | || | | | |||||||| ||| |||||||| | | || || || |||| Sbjct 7770 CACGCGGACGAATGTTTATTATCATGGTGGGAGCTCTAGGCTCCTCACAGTAGGCCATCC 7829 Query 5756 ATATT 5760 ||||| Sbjct 7830 ATATT 7834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25016837612976