Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001457.1 Length=7353 Score E Sequences producing significant alignments: (Bits) Value seq8046 114 6e-22 >seq8046 Length=7925 Score = 114 bits (126), Expect = 6e-22 Identities = 234/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 1974 GGAGATTGGAAGCCAATCTCACAGTTTTTAAAATATCAAGGTGTTAATATATTATCCTTT 2033 |||||||||||||| || | ||||||||| |||| || || | | | || || Sbjct 4048 GGAGATTGGAAGCCTATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTGTCATTC 4107 Query 2034 CTTATAGTGCTTAAATCATTTTTAAAAGGTATTCCaaaaaaaaaCTGTATAGTTATTCAT 2093 ||| | |||| ||||||||||||||| | || || || || || ||||| || || Sbjct 4108 CTTGCTGCCTTTAAGTCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTAT 4167 Query 2094 GGTCCACCAGATACAGGAAAATCATTATTTTG--TTATTCTTTTATAAAATTTTTAAAAG 2151 || || |||||||||| ||||||| || || | | ||||| | | || || | Sbjct 4168 GGACCTGCAGATACAGGCAAATCATATTTCTGCATGAGTCTTT--TGCAGTTCCTAGGTG 4225 Query 2152 GAAAAGTAGTTTCATATGTAAATAGAAGTAGCCATTTTTGGTTGCAGCCTCTGATGGATT 2211 | ||| | ||||||| ||| |||||||| |||||| ||||||| | || Sbjct 4226 GCGCTGTAATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACA 4285 Query 2212 GCAAGGTAGGATTTATGGATGATGCTACCTATGTGTGCTGGACATATATAGATCAAAATT 2271 | ||| ||||| | |||| ||||| || ||||||||| ||||| ||| | || Sbjct 4286 GTAAGATAGGACTACTGGACGATGCGACGGCCCAGTGCTGGACGTATATTGATACATATC 4345 Query 2272 TAAGGAATGCATTAGATGGTAATCCAATGTGTATTGACGCTAAACA 2317 | ||||| | ||||||| || || | |||| ||| ||||| Sbjct 4346 TTAGGAACCTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACA 4391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23404705384752