Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001458.1 Length=7348 Score E Sequences producing significant alignments: (Bits) Value seq8046 113 2e-21 >seq8046 Length=7925 Score = 113 bits (124), Expect = 2e-21 Identities = 320/479 (67%), Gaps = 12/479 (3%) Strand=Plus/Plus Query 2037 GGTGACTGGAAACATATTGTAAAGTTCTTGAGGTTTCAAGAAGTAGAATT--TATAAGTT 2094 || || ||||| | ||| |||||||| || ||| ||| | ||||| || | | | || Sbjct 4048 GGAGATTGGAAGCCTATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTGTCA-TT 4106 Query 2095 TCATGATAGCATTTAAGGAATTGTTAAGTGGTAAACCAAAGAAAAATTGTCTTGTAATAT 2154 | || | || |||||| ||| |||| ||| || ||||| ||||| | || | | Sbjct 4107 CCTTGCT-GCCTTTAAGTCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTT 4165 Query 2155 ATGGTCCACCAAATACTGGTAAATCTATGTTT-TGTATGAGTTTGTTGAGAGTATTAAAA 2213 |||| || || |||| || ||||| || ||| || |||||| | ||| | || Sbjct 4166 ATGGACCTGCAGATACAGGCAAATC-ATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGT 4224 Query 2214 GGAAAAGTAATATCTTATGTAAATAGCAAAAGTCAATTTTGGTTGCAACCACTAGCTAGC 2273 || |||||||| |||| ||| || || || |||||| |||| || ||||| | Sbjct 4225 GGCGCTGTAATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGAC 4284 Query 2274 ACTAAAATAGCATTATTAGATGATGCAACAAAACCAGCATGGGAT-TATATTGATTTATT 2332 | ||| |||| | || | || ||||| || |||| ||| ||||||||| || Sbjct 4285 AGTAAGATAGGACTACTGGACGATGCGACGGC-CCAGTGCTGGACGTATATTGATACATA 4343 Query 2333 TTTGAGAAATGCTTTAGATGGGAATCCTATTTGTGTAGATCTGAAACATAAGGCACCACA 2392 | | || || ||||||| || || | || |||| |||||||||| | | | Sbjct 4344 TCTTAGGAACCTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCT 4403 Query 2393 ACAAATAAAATGTCCTCCACTTATGATAACTTCTAATATAAATGTTAAGGCTGATGTATG 2452 || ||||||||||||||| | |||||||| | || |||||| | | || | | Sbjct 4404 GCAGATAAAATGTCCTCCATTAATGATAACAACCAACATAAATCCTCTAGAGGAGGACAG 4463 Query 2453 TTGGATGTATTTACATAGTAGGATAACA-TGTTTTGAATTTAAACAA-CCTTTTCCATT 2509 |||| |||||| | || || ||||| ||||| || || | ||| || ||||| || Sbjct 4464 ATGGAAGTATTTGCGCAGCAGAGTAACACTGTTT--AAGTTTACCAACCCATTTCCCTT 4520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23388712009472