Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001531.1 Length=7746 Score E Sequences producing significant alignments: (Bits) Value seq8046 80.6 1e-11 >seq8046 Length=7925 Score = 80.6 bits (88), Expect = 1e-11 Identities = 112/157 (71%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 4398 AACCTGCAAACAGGCAGGCACTTGCCCCCCTGATGTTATTAATAAAGTGGAACAAACAAC 4457 ||| ||||| ||||| || || |||||||||||| | || || |||||||| || Sbjct 6362 AACATGCAAGCAGGCTGGAACGTGCCCCCCTGATATCATACCTAGGGTGGAACAGGACAC 6421 Query 4458 AGTTGCTGACAATATTTTAAAATATGGCAGTGCTGGTGTATTTTTTGGTGGCCTTGGTAT 4517 | | ||||| | || |||||| ||||| || || ||||| |||||||| ||||| Sbjct 6422 ATTAGCTGATAGAATACTAAAATGGGGCAGCCTAGGGGTCTTTTTCGGTGGCCTCGGTAT 6481 Query 4518 TAGTACAGGCCGAGGAACTGGGGGTGCTACAGGGTAC 4554 |||| || | || |||||||| ||||| ||| Sbjct 6482 AGGTACTGGAAGCGGCACTGGGGGACGCACAGGCTAC 6518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24661784681760