Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001583.1 Length=7855 Score E Sequences producing significant alignments: (Bits) Value seq8046 277 9e-71 >seq8046 Length=7925 Score = 277 bits (306), Expect = 9e-71 Identities = 737/1112 (66%), Gaps = 17/1112 (2%) Strand=Plus/Plus Query 1733 ATGTTATTAAATGTGCCAGAAACGCAATTACTAATTGAACCACCAAAATTGCGAAGTACA 1792 ||| | ||||| | || || | ||| | || || |||||||||||| | |||||||| Sbjct 3625 ATGCTGTTAAACATTCCCGAGAAGCATATGCTCATAGAACCACCAAAACTAAGAAGTACA 3684 Query 1793 GCAGTAGCATTATATTTTTATAAAACAGGGTTGTCCAATATAAGTGAGACATATGGAGAT 1852 | | || || || | || || ||| || ||| |||||| ||||| || Sbjct 3685 CCTGCTGCCTTGTACTGGTACAAGACATCCATGGGTAATGGGAGTGAGGTCTATGGGGAG 3744 Query 1853 ACACCAGAATGGATAGTACGACAAACACAATTAGAACATAGTTTTGATGATGCTACATTT 1912 ||||||||||||||||| |||| |||| ||| ||| ||| | || |||| || Sbjct 3745 ACACCAGAATGGATAGTGAGACAGACACTGATAGGACACAGTATGGAGGATGAGCAGTTC 3804 Query 1913 GATTTATCAAAAATGGTGCAATGGGCGTTCGATCATGACATAACAGATGATAGTGAAATT 1972 | ||||| |||||||| | || | || ||||||||||| || || || | | | Sbjct 3805 AAATTATCTGTCATGGTGCAGTACGCATATGACCATGACATAACGGACGAGAGCGCACTG 3864 Query 1973 GCATTTAAATATGCACAGTTAGCTGACATAGATAGTAATGCAGCTGCCTTTTTAAAAAGC 2032 |||||| | || |||||| | || ||| | || ||||| || || ||| |||| ||| Sbjct 3865 GCATTTGAGTACGCACAGCTGGCGGACGTGGACGCCAATGCGGCAGCATTTCTAAACAGC 3924 Query 2033 AATTGTCAGGCAAAATATGTAAAAGACTGTGCAACCATGACTAGACATTATAAAAGAGCA 2092 || || ||||| || || |||||||| | || ||| ||||| || || | ||| Sbjct 3925 AACTGCCAGGCCAAGTACCTAAAAGACGCGGTGACAATGTGCAGACACTACAAGCGTGCA 3984 Query 2093 CAGA---AACGATCTATGTGTATGTCACAATGGCTACAATATAGATGTTCTAAAATAGAA 2149 ||| ||| | ||| ||||| || ||| | ||| |||| | || ||| | Sbjct 3985 GAGAGGGAACAA---ATGAGTATGAGCCAGTGGATCAAATTTAGAGGGAGCAAGATATCA 4041 Query 2150 GAGGGCGGGTCGTGGAAGGAAATTGCCAAAtttttaaggtttcaacatgtaaactttat- 2208 |||| || |||||| || | || ||||||||| ||| ||| | || | Sbjct 4042 GAGGAAGGAGATTGGAAGCCTATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTG 4101 Query 2209 ttattttttacaagtgttaaaacagtttttaaaGGGTACCCCAAAGCACAATTGTATAGT 2268 | ||| || | |||| || |||||||| ||| || ||| | ||||| ||||| Sbjct 4102 TCATTCCTTGCTGCCTTTAAGTCA-TTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGT 4160 Query 2269 AATATATGGACCGCCAAATACTGGTAAGTCACAGTT-TGCAATGAGTTTTATAAAATTTA 2327 | |||||||| || |||| || || ||| | || ||| |||||| || | | || Sbjct 4161 GTTTTATGGACCTGCAGATACAGGCAAATCATATTTCTGC-ATGAGTCTTTTGCAGTTCC 4219 Query 2328 TGCAAGGGTCAGTCATTTCATATGTAAATTCAAATAGCCATTTTTGGCTGCAGCCTTTAG 2387 | || | || || ||||||| ||||| | |||||| |||||||||||||| |||| Sbjct 4220 TAGGTGGCGCTGTAATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAG 4279 Query 2388 AAGATGCAAAAGTTGCAGTATTAGATGATGCTACATATAGCTGCTGGTTATATATTGATA 2447 || || | | | || | || ||||| || |||||| |||||||||| Sbjct 4280 CTGACAGTAAGATAGGACTACTGGACGATGCGACGGCCCAGTGCTGGACGTATATTGATA 4339 Query 2448 AATATTTACGTAACTTTTTAGATGGAAATCCCTGTTGTATAGACAGAAAACATAGAAGCC 2507 |||| | | ||| | |||||||||| |||| |||||||||| ||||||| | || Sbjct 4340 CATATCTTAGGAACCTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCC 4399 Query 2508 TACTGCAAGTTACATGCCCCCCATTAATAATTACCTCAAATATAAATCCTCAAGAAGATA 2567 | ||||| | | ||| || |||||||| || || | || |||||||||| ||| || Sbjct 4400 TGCTGCAGATAAAATGTCCTCCATTAATGATAACAACCAACATAAATCCTCTAGAGGAGG 4459 Query 2568 ACTCACTTTTGTATTTACATAGTAGAGTAACAGTGATACCATTTCCAAATACATTTCCAT 2627 || | |||||| | || ||||||||| || | ||| | || ||||||| | Sbjct 4460 ACAGATGGAAGTATTTGCGCAGCAGAGTAACACTGTTTAAGTTTACCAACCCATTTCCCT 4519 Query 2628 TTGACAGCAATGGGAATCCTGTATATGCATTGACTGATGTAAATTGGAAAAGCttttttt 2687 | | ||| ||| | || |||| | | | | ||| ||| |||||| ||||||| Sbjct 4520 TCGCAAGCCCAGGGGAGCCCCTATACCCTATAAATAATGCAAACTGGAAATGCTTTTTCC 4579 Query 2688 CCACCACCTGGTCCAGATTAGATTTGGAGGAGGAC-GCGGA-CA--AAGAAAATGGAGAA 2743 | | |||||| | |||| | | || | | ||| || |||| |||||| || Sbjct 4580 AAAGGTCGTGGTCCCGCCTAGACCT-AAACAGTCCAGAGGATCAGGAAGACAATGGA-AA 4637 Query 2744 CCTTTGCCAG-CGTTTAAATGCGTGCCAGGAGAAAATACTAGACTATTATGAACTGGACA 2802 | | || || |||||| ||||||||||||||| | ||||| |||||| || | Sbjct 4638 CACTGGCGAGCCGTTTAGATGCGTGCCAGGAGACGTTGCTAGAACTGTATGAAAAAGATA 4697 Query 2803 GTAATAAATTAACTGATCAAATTGATTATTGG 2834 | || ||| | || |||||| | ||||| Sbjct 4698 GCAACAAACTTGAGGACCAAATTAAACATTGG 4729 Score = 214 bits (236), Expect = 9e-52 Identities = 792/1233 (64%), Gaps = 21/1233 (2%) Strand=Plus/Plus Query 5771 CCTAAGGTATCTGCCTATCAGTACAGGGTATTTAGAGTGCACCTACCTGATCCTAATAAA 5830 || |||||||| | ||| |||||| | || || || | || || || || ||||| Sbjct 25 CCCAAGGTATCGGGCTACCAGTACCGTGTGTTCCATGTAAAGCTGCCGGACCCCAATAAG 84 Query 5831 TTTGGATTGCCTGATCCACAGTTATATAATCCTGACACAGAACGCCTGGTGTGGGCCTGT 5890 ||||| |||||||| | | | ||| |||| ||||| | || ||| ||||||||||| Sbjct 85 TTTGGTCTGCCTGATGCCAACCTCTATGATCCCGACACCCAGCGTCTGCTGTGGGCCTGT 144 Query 5891 GTTGGTGTTGAAGTTGGTAGAGGACAGCCATTAGGCATTGGCCTTAGTGGACATCCTTTG 5950 || || ||||| || ||| | || ||||| | || | || | || || |||| Sbjct 145 GTCGGAGTTGAGGTGGGTCGTGGCCAGCCTCTGGGTGTGGGGATATCCGGTCACCCTTAC 204 Query 5951 TTTAATAAGTTGGATGATACCGAAAACTCTCATTTGGCTACTGTAAATGCAGACACTGAC 6010 | ||| | |||||||||| ||||| | || | | | | || || ||| Sbjct 205 TATAACAGACTGGATGATACTGAAAATGCACACAA---TCCCGACACAGCTGA---TGAT 258 Query 6011 AACAGGGACAATGTTTCAGTTGATAATAAACAAACACAGTTATGTATTATAGGTTGTACA 6070 ||||| ||| | || | ||| ||||||| |||||| | | |||| | || || | Sbjct 259 GGGAGGGAGAATATATCCATGGATTATAAACAGACACAGCTGTTTATTTTGGGATGCAAG 318 Query 6071 CCGCCCTTGGGAGAGCACTGGGGTATTGGCACTATATGTAAAAATACACAGACACAACGT 6130 || || | || || || ||| | ||||||| || | || | | Sbjct 319 CCTCCTATAGGTGAACATTGGTCCAAGGGCACTACCTGCAGCGGGTCATCTGCTGT---T 375 Query 6131 GGGGATTGcccccccTTAGAATTAATTTCCAGCATTATTGAGGATGGCGATATGATTGAT 6190 || || || || ||| | | || | || || |||||||||||| |||||| |||| Sbjct 376 GGTGACTGTCCTCCCCTTCAGTTTACAAACACCACTATTGAGGATGGGGATATGGTTGAA 435 Query 6191 ACAGGCTTTGGAGCTATGGATTTTACTGCCTTACAGGCTACCAAATCAGATGTGCCCATT 6250 || || || || || |||||||| | || ||||| | | |||||| ||||| ||| | Sbjct 436 ACCGGGTTCGGGGCCCTGGATTTTGCCGCTCTACAGTCCAACAAATCTGATGTCCCCCTG 495 Query 6251 GATATTAGTCAATCCACATGTAAATATCCTGATTATCTTAAAATGTCTGCAGATACATAT 6310 |||||| || || |||||||||||| || ||||| |||||| |||| || | ||| Sbjct 496 GATATTTGTACTAACATATGTAAATATCCGGACTATCTGAAAATGGCTGCTGACCCCTAT 555 Query 6311 GGAAACAGCATGtttttttttCTTCGCCGGGAACAATTATTTGCCAGACATTTTTATAAT 6370 || | ||||| |||| || ||| |||| || | || || | ||||||| |||| Sbjct 556 GGCGATTCTATGTTCTTTTCCCTGCGCAGGGAGCAGATGTTCACCCGGCATTTTTTTAAT 615 Query 6371 AAGGCGGGGGCTGTTGGGGATGCTATACCCACCACTTTGTATATTAAAGGTGCTGAATCA 6430 || ||| | | || || || | || | ||| | ||| || || | | Sbjct 616 CGGGGTGGGTCGATGGGTGACGCCCTCCCGGAGGAGCTATATGTCAAAAGTTCT--ACCG 673 Query 6431 GGCAGGGAGCCCCCTACATCTTCTATTTATTCTGCTACACCTAGTGGCTCTATGGTTACT 6490 ||| ||||| | || | |||| | | || || |||||||||||||| | Sbjct 674 TCCAG---ACCCCCGGTA-GTTATGTTTACACCTCCACTCCCAGTGGCTCTATGGTATCC 729 Query 6491 TCGGATGCACAACTATTTAATAAGCCATACTGGTTACAACGTGCACAGGGTCATAATAAT 6550 || || || ||||||| ||||| |||||| | | | | || ||||| ||||| ||| Sbjct 730 TCTGAACAGCAGTTATTTAACAAGCCTTACTGGCTGCGAAGGGCCCAGGGACATAACAAT 789 Query 6551 GGTATCTGTTGGGGCAATCAATTGTTTGTTACCTGTGTTGATACCACCCGCAGTACTAAC 6610 || || || |||||||||| | || | || || || ||||| ||||| || || Sbjct 790 GGCATGTGCTGGGGCAATCGGGTCTTCCTGACAGTGGTGGACACCACGCGCAGCACAAAT 849 Query 6611 CTTACCATTAGTACATTATCTGCAGCATCTGCATCCACTCCATTTAAACCATCTGATTAT 6670 | | | || | ||| | | | || ||| | ||| | || ||||| Sbjct 850 GTCTCTTTGTGTGC---CACTGTA--AAC-ACAGAAACTAATTATAAGGCCTCCAATTAT 903 Query 6671 AAACAATTTATAAGACATGGCGAAGAATATGAATTACAATTTATATTTCAGTTGTGTAAA 6730 || ||| | || ||| || || ||||| || || || || ||||| |||| ||| Sbjct 904 AAGGAATACCTTAGGCATATGGAGGAGTATGATTTGCAGTTCATTTTTCAACTGTGCAAA 963 Query 6731 ATAACACTTACAACAGATGTTATGGCTTACATACATTTAATGAATGCCTCCATATTGGAG 6790 ||||||||||| | || | ||||| ||||||||| ||| |||| | | ||| Sbjct 964 ATAACACTTACCCCCGAGATAATGGCATACATACATAACATGGATGCGCGGTTGCTTGAG 1023 Query 6791 GATTGGAATTTTGGACTAACCTTACCTCCCACTGCTAGTTTGGAAGATGCCTATAGGTTT 6850 || ||||| ||||| || || || || | || || ||| |||| |||| |||| | Sbjct 1024 GACTGGAACTTTGGTGTACCCCCGCCCCCGTCCGCCAGCTTGCAAGACACCTACAGGTAT 1083 Query 6851 ATTAAAAACTCTGCTACTACCTGTCAGCGTAACGCCCCTCCTGTGCCAAAGGAAGATCCT 6910 | | | || | || |||||| | | || ||| | | ||||| Sbjct 1084 CTGCAGTCCCAAGCGATAACATGTCAGAAGCCCACACCCCCTAAGACCCCTACTGATCCC 1143 Query 6911 TTTCAAAAATTTAAATTTTGGGATGTAGATTTAAAAGAAAAATTTTCTATTGATTTGGAT 6970 | | || | | ||| |||||||| ||| | | |||| ||||| || ||| ||||| Sbjct 1144 TATGCAACCATGACATTCTGGGATGTGGATCTCAGTGAAAGTTTTTCCATGGATCTGGAT 1203 Query 6971 CAATTTCCACTAGGGCGTAAGTTTATGTTACAG 7003 ||||| || || || || |||||| |||| ||| Sbjct 1204 CAATTCCCCCTGGGACGCAAGTTTTTGTTGCAG 1236 Score = 131 bits (144), Expect = 8e-27 Identities = 181/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 5553 TAAACGCCGTAAACGTATGCCTTAttttttttCAGATGGCTTTGTGGCGTACTAGTGACA 5612 |||||| ||||||||| ||| ||||| ||| ||||||||| ||||||| ||| ||| | Sbjct 7652 TAAACGACGTAAACGTGTGCACTATTTCTTTGCAGATGGCTATGTGGCGGCCTAATGAAA 7711 Query 5613 GCAAGGTATATCTTCCTCCCACCCCTGTGTCTCGGGTTGTCAACACGGATGAATATGTAA 5672 |||||||||| || ||||| || ||||| || ||| ||| ||||||| ||||| | Sbjct 7712 GCAAGGTATACCTGCCTCCAACACCTGTCTCAAAGGTGCTCAGTACGGATGTCTATGTCA 7771 Query 5673 CTCGCACCGGCATATATTATTATGCGGGCAGCTCTCGTTTATTAACATTAGGACATCCAT 5732 | || || | |||||| ||| || |||||| | | | ||| |||| ||||||| Sbjct 7772 CGCGGACGAATGTTTATTATCATGGTGGGAGCTCTAGGCTCCTCACAGTAGGCCATCCAT 7831 Query 5733 ATTTTTCCATACCTAAAACTGGC---CAAAAGGCCGAAATTCCTAAGGTATCTGCCTATC 5789 ||| ||| ||| |||| | || | |||| | || |||||||| | ||| | Sbjct 7832 ATTATTCTATAAAGAAAAATAGCACTAATAAGGTGTCTGTACCCAAGGTATCGGGCTACC 7891 Query 5790 AGTACAGGGTATT 5802 ||||| | || || Sbjct 7892 AGTACCGTGTGTT 7904 Score = 111 bits (122), Expect = 8e-21 Identities = 462/718 (64%), Gaps = 26/718 (4%) Strand=Plus/Plus Query 4468 ATTGAACCTGTGGGTCCTACAGAACCTTCTATAGTTACTTTGGTGGAGGAATCTAGTATT 4527 |||||||||||||| | | ||||| ||||| |||| ||| |||||||| || || || Sbjct 6585 ATTGAACCTGTGGGGGCGTCCGAACCATCTATTGTTAATTTAGTGGAGGATTCCAGCATC 6644 Query 4528 ATACAATCTGGAGCCCCTATACCTACATTTAGTGG---TGGCAATGGCTTTGAACTTACC 4584 || | |||| || || || || |||| || ||| ||| ||||| ||||| Sbjct 6645 ATTAATGCTGGTTCCTCTCATCCCACCTTTACCGGCACTGG---TGGGTTTGAGGTTACC 6701 Query 4585 ACATCCTCTGCAACAACACCTGCTGTGTTGGACATCACCCCCTCTGCTGGTACTGTACAT 4644 |||||| | | || ||||| || |||||||||| || || | | | || || Sbjct 6702 ACATCCACGGTGACTGACCCTGCAGTCCTGGACATCACTCCTTCGGGTAATGGGGTGCAG 6761 Query 4645 GTAA-CA--AGTACCAATATACAAAATCCATTATATATTGAACCCCCTATA---GATATA 4698 || | || |||| | | | ||||| | | | ||| || |||| || Sbjct 6762 GTTAGCAGCAGTAGCTTTGTG---AATCCTCTCTTCACTGACCCTGCTATTATTGAGGCT 6818 Query 4699 CCACAGGCCGGGGAAGCATCAGGTCATATATTTACTACAACGTCCACAGCTGGCACACAT 4758 || || | ||||| | |||| ||| | || || || ||||| | || | || Sbjct 6819 CCTCAAACTGGGGAGGTTACAGGGCATGTGCTTGTTAGCACTGCCACATCAGGGTCCCAC 6878 Query 4759 AGTTATGAAGAAATTCCAATGGAAGTATTTGCTTCTACTAATGGAACAGGATTAGAACCT 4818 | | || ||||| |||||| | || || | || ||| ||| ||| || Sbjct 6879 GGCTTCGAGGAAATACCAATGCAGACCTTCGCGACCTCTGGTGGGGATGGAGGAGAGCCC 6938 Query 4819 ATTAGTAGTACACCTATTCCTGGTATACAACGAGTGTCAGCTCCTCGTTTGTATAGTAAG 4878 || ||||| || ||| | ||||| | | | || | | || || | ||||||| | Sbjct 6939 ATAAGTAGCACTCCTGTCCCTGGCGTGCGCAGGGTTGCTGGGCCCCGCCTTTATAGTAGG 6998 Query 4879 GCCTATCAACAGGTAAAGGTTACAGATCCCAATTTTATTGGTAATCCCTCCACATTTGTT 4938 ||| |||| ||||| ||| || || ||||||| ||| | || ||||| | Sbjct 6999 GCCAATCAGCAGGTGCGGGTATGGGACCCTGCCTTTATTGAACGTCC-TGCAGATTTGGT 7057 Query 4939 -ACCTTTGATAATCCTGCATATGAACCTATAGATGAAACACTTACATAT--GCTTCCAGT 4995 || ||||| || |||| ||||| || || ||||| | | || | || ||||| Sbjct 7058 GACATTTGACAACCCTGTCTATGACCCC---GAGGAAACTATAATATTTCAGCATCCAGG 7114 Query 4996 AGTACTGTAGC-ACCTGACCCCGATTTTTTGGACATTATTGCATTGCATCGTCCGGCCCT 5054 | | ||| ||| ||||| || || ||||||| | || |||| || || ||||| Sbjct 7115 CTTGCATGAGCCACCGGACCCTGACTTCCTGGACATAGTGTCACTGCACCGCCCTGCCCT 7174 Query 5055 TACATCT---CGCAAAGGTACTGTACGCTATAGTAGGTTGGGTCAAAAGGCCACTATGAA 5111 || || || | |||||||| |||| ||| ||||||| | |||||| | Sbjct 7175 CACGTCCACCCGGCAGGGTACTGTCCGCTTCAGTCGGTTGGGACGCCGGGCCACGCTTCG 7234 Query 5112 AACACGTAGTGGAAAACAAATTGGAGCTACAGTACATTATTATCATGATATTAGTCCT 5169 || |||||||| ||||||||||| |||| ||||| | ||||||||||| || ||| Sbjct 7235 CACGCGTAGTGGTAAACAAATTGGGGCTAGGGTACACTTCTATCATGATATCAGCCCT 7292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25010440262864