Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001587.1 Length=7723 Score E Sequences producing significant alignments: (Bits) Value seq8046 329 2e-86 >seq8046 Length=7925 Score = 329 bits (364), Expect = 2e-86 Identities = 764/1136 (67%), Gaps = 22/1136 (2%) Strand=Plus/Plus Query 1755 ATATGTTAATAGAACCACCTAGACTAAGAAGCACGCCATGTGCATTATACTGGTACAGAA 1814 ||||| | ||||||||||| | ||||||||| || || ||| || |||||||||| | Sbjct 3650 ATATGCTCATAGAACCACCAAAACTAAGAAGTACACCTGCTGCCTTGTACTGGTACAAGA 3709 Query 1815 CTAGCCTATCAAACATTAGTGAAACGGT-----GGGAGAAGTACCCGAATGGATTAAAAG 1869 | | | || ||||| ||| |||||| ||| |||||||| || Sbjct 3710 CATCCATGGGTAATGGGAGTGA---GGTCTATGGGGAGAC--ACCAGAATGGATAGTGAG 3764 Query 1870 ACAAACAGTAGTACAGCACAGCTTAGAGGACTGTCAATTTGACCTATCTCAAATGGTACA 1929 ||| ||| | || ||||| | ||||| || || | ||||| ||||| || Sbjct 3765 ACAGACACTGATAGGACACAGTATGGAGGATGAGCAGTTCAAATTATCTGTCATGGTGCA 3824 Query 1930 GTGGGCATTTGATAATGACATAACAAATGACTGTGAAATAGCATATAAATATGCATTATT 1989 || |||| ||| |||||||||| | || | | | | |||| | | || ||| | Sbjct 3825 GTACGCATATGACCATGACATAACGGACGAGAGCGCACTGGCATTTGAGTACGCACAGCT 3884 Query 1990 AGCATCTGAGGATAGCAATGCTGCTGCATTTTTAAAAAGCAA-TGCACAAGCAAAATATG 2048 || | ||| |||||| || |||||| |||| ||||| ||| || || || || Sbjct 3885 GGCGGACGTGGACGCCAATGCGGCAGCATTTCTAAACAGCAACTGC-CAGGCCAAGTACC 3943 Query 2049 TTAAGGATTGTGGAACAATGTGTAGACATTATAAAGCTGCAGAACGTAAACAAATGACTA 2108 | || || | |||||||| ||||| || || |||||| | ||||||||| || Sbjct 3944 TAAAAGACGCGGTGACAATGTGCAGACACTACAAGCGTGCAGAGAGGGAACAAATGAGTA 4003 Query 2109 TGTCACAATGGATTACACATAGATGTGATTTA-ATAGATGATGGAGGAAACTGGAAACAT 2167 || || ||||| | | |||| | || | ||| || | |||| | ||||| | | Sbjct 4004 TGAGCCAGTGGATCAAATTTAGAGG-GAGCAAGATATCAGAGGAAGGAGATTGGAAGCCT 4062 Query 2168 ATTGTGCAATTTTTAAGATATCAGCAGGTTGAATTTGTACCGTTTTTAATTGCTTTAAAA 2227 || || | |||||||| ||||| ||| || || || | || | ||| || || Sbjct 4063 ATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTGTCATTCCTTGCTGCCTTTAAG 4122 Query 2228 CAATTTTTAAAGGGTATACCAAAACAAAATTGTATAGTTATATATGGACCACCAGATACA 2287 ||||||||| ||| | || || | ||||| ||||| | |||||||| |||||||| Sbjct 4123 TCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGCAGATACA 4182 Query 2288 GGAAAGTCACATTTTGGAATGAGTTTAATGCAGTTTATGCAAGGTGTGGTTATTTCATAT 2347 || || ||| |||| | |||||| | ||||||| | || | || || |||||| Sbjct 4183 GGCAAATCATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATATCATAT 4242 Query 2348 GTAAATTCCAATAGTCATTTTTGGTTATCGCCATTGGCTGATGCAAAAATGGCATTATTA 2407 | ||||||| ||| || |||||| | ||| || ||||| || || | | || | Sbjct 4243 GCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGACTACTG 4302 Query 2408 GATGATGCAACACCTGCATGCTGGACATATATTGATAGATATTTAAGAAATGCATTAGAT 2467 || ||||| || | |||||||| |||||||||| |||| | || || | ||||| Sbjct 4303 GACGATGCGACGGCCCAGTGCTGGACGTATATTGATACATATCTTAGGAACCTACTAGAT 4362 Query 2468 GGCAATCCTATGTGTTTAGACAGAAAACATAAACATTTATTACAAATTAAATGTCCTCCA 2527 || || || | || ||||||| |||||||| | | || || |||||||||||| Sbjct 4363 GGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGCAGATAAAATGTCCTCCA 4422 Query 2528 TTACTAATAACATCAAATACAAATCCTAAAGCAGATGATACCTGGAAATATTTGCACAGT 2587 ||| | |||||| | || | ||||||| || || || | ||||| ||||||| ||| Sbjct 4423 TTAATGATAACAACCAACATAAATCCTCTAGAGGAGGACAGATGGAAGTATTTGCGCAGC 4482 Query 2588 AGAATGAAAGTGTTTACGTTTTCAAATCCATTTCCATTTGACAGTAATGGAAATCCACTA 2647 ||| | | | |||||| |||| | || |||||||| || | || || | || ||| Sbjct 4483 AGAGTAACACTGTTTAAGTTTACCAACCCATTTCCCTTCGCAAGCCCAGGGGAGCCCCTA 4542 Query 2648 TACCAACTTACTAATGAAAACTGG-AAGGCATTTTTTACAAA-GACGTGGTCAAAACTAG 2705 |||| | | ||||| ||||||| || || ||||| |||| | ||||||| |||| Sbjct 4543 TACCCTATAAATAATGCAAACTGGAAATGC--TTTTTCCAAAGGTCGTGGTCCCGCCTAG 4600 Query 2706 A-TTTAACAGAGGACGACGACAAGGAAAATGATGGAGACACTGTGCAAACGTTTAAGTGC 2764 | | ||||| | || || ||||| | ||||| |||||| | |||||| ||| Sbjct 4601 ACCTAAACAGTCCA-GAGGATCAGGAAGACAATGGAAACACTGGCGAGCCGTTTAGATGC 4659 Query 2765 GTGTCAGGACGCAATCCTAGAACTGTATGAACGTGATAG-TATACATTTAAGTGATCATA 2823 ||| ||||| | | ||||||||||||||| ||||| | | | || || || || | Sbjct 4660 GTGCCAGGAGACGTTGCTAGAACTGTATGAAAAAGATAGCAACAAACTTGAG-GACCAAA 4718 Query 2824 TTGATCACTGGAAACACGTGCGACTGGAAAATGTATTATTACATAAGGCACGTGAA 2879 || | || ||| || || || || |||||||| | || |||||| || ||| Sbjct 4719 TTAAACATTGGGCGCAGGTCCGGCTAGAAAATGTCATGTTGTTTAAGGCTCGGGAA 4774 Score = 291 bits (322), Expect = 4e-75 Identities = 787/1192 (66%), Gaps = 33/1192 (3%) Strand=Plus/Plus Query 5734 TGCCAGATCCCAATAAATTTGGGTTCCCAGATGCATCTTTTTATAATCCTGACAAGGAGC 5793 |||| || |||||||| ||||| | || ||||| | ||| |||| |||| ||| Sbjct 68 TGCCGGACCCCAATAAGTTTGGTCTGCCTGATGCCAACCTCTATGATCCCGACACCCAGC 127 Query 5794 GGTTGGTTTGGGCCTGTGCAGGCGTTGAGGTTGGACGCGGACAGCCATTAGGTATAGGTA 5853 | || | |||||||||| || |||||||| || || || ||||| | ||| | || | Sbjct 128 GTCTGCTGTGGGCCTGTGTCGGAGTTGAGGTGGGTCGTGGCCAGCCTCTGGGTGTGGGGA 187 Query 5854 CTAGTGGTAATCCTTT-TATGAATAAACTTGAGGATACTGAAAATGCTGCAAAATATATT 5912 ||| | |||| ||| || | ||| || |||||||||||||| || ||| Sbjct 188 TATCCGGTCACCCTTACTAT-AACAGACTGGATGATACTGAAAATGCA-CACAATCCC-- 243 Query 5913 GGTGGAAACATAGCA-GATAGTAGGGAGTGTATGTCAGTAGATTATAAACAAACACAGTT 5971 || ||| | ||| | |||||| ||| || | ||||||||||| |||||| | Sbjct 244 ----GACACAGCTGATGATGGGAGGGAGAATATATCCATGGATTATAAACAGACACAGCT 299 Query 5972 ATGTATTGTAGGCTGTAAGCCTCCCTTAGGGGAACATTGGGGTACAGGCACACCATGTGG 6031 | |||| | || || |||||||| |||| ||||||||| | ||||| | || | Sbjct 300 GTTTATTTTGGGATGCAAGCCTCCTATAGGTGAACATTGGTCCAAGGGCACTACCTGCAG 359 Query 6032 TACCCAAAATGCTG---GGGAATGTCCTCCGCTTGAATTAAAGAACACCACTATACAGGA 6088 | ||||| | || |||||||| ||| | || | ||||||||||| |||| Sbjct 360 CGGGTCATCTGCTGTTGGTGACTGTCCTCCCCTTCAGTTTACAAACACCACTATTGAGGA 419 Query 6089 TGGTGATATGATTGATGTGGGCTTTGGTGCCATGGATTTTAAGGCCTTACAGGCAAATAA 6148 ||| |||||| |||| || || || ||| |||||||| || ||||| | || || Sbjct 420 TGGGGATATGGTTGAAACCGGGTTCGGGGCCCTGGATTTTGCCGCTCTACAGTCCAACAA 479 Query 6149 AAGTGATGTGCCCATTGATATTTCCAACACTATATGTAAATATCCAGATTATCTAGGCAT 6208 | |||||| ||| | ||||||| | | |||||||||||||| || ||||| || Sbjct 480 ATCTGATGTCCCCCTGGATATTTGTACTAACATATGTAAATATCCGGACTATCTGAAAAT 539 Query 6209 GGCCGCAGATCCCTATGGCGATTCTATGTGGTTTTATATTCGTAGGGAACAAATGTTTGT 6268 ||| || || ||||||||||||||||||| |||| | || ||||| || ||||| Sbjct 540 GGCTGCTGACCCCTATGGCGATTCTATGTTCTTTTCCCTGCGCAGGGAGCAGATGTTCAC 599 Query 6269 TAGACACCTATTTAACAGGGCAGGTACTGTAGGCGATGCTATTCCAGATGA-CTTAATGA 6327 | || | ||||| ||| || | | || || || | || || || || ||| Sbjct 600 CCGGCATTTTTTTAATCGGGGTGGGTCGATGGGTGACGCCCTCCCGGAGGAGCTATATG- 658 Query 6328 TTAAGGGTACAGGCAATACTGCATCGCCATCCAGTTG-TGTGTTTTATCCT--ACTCCTA 6384 | || || | ||| | | | || || | | ||||| ||| ||||| | Sbjct 659 TCAAAAGTTC------TACCGTCCAGACCCCCGGTAGTTATGTTTACACCTCCACTCCCA 712 Query 6385 GTGGGTCTATGGTATCCTCAGATGCACAAATTTTTAATAAGCCTTATTGGTTGCAAAAGG 6444 |||| |||||||||||||| || || | ||||| |||||||| ||| ||| || || Sbjct 713 GTGGCTCTATGGTATCCTCTGAACAGCAGTTATTTAACAAGCCTTACTGGCTGCGAAGGG 772 Query 6445 CCCAGGGACAAAACAATGGCATTTGCTGGCATAATCAACTGTTTTTAACTGTTGTAGATA 6504 |||||||||| ||||||||||| |||||| |||| | || | || || || || | Sbjct 773 CCCAGGGACATAACAATGGCATGTGCTGGGGCAATCGGGTCTTCCTGACAGTGGTGGACA 832 Query 6505 CTACTAGAAGCACAAACTTTTCAGTTTGTGTAGGTACACAATCCACAAGTACAACTGCAC 6564 | || | |||||||| | || ||||||| | || | |||| || | | Sbjct 833 CCACGCGCAGCACAAA--TGTCTCTTTGTGT-GCCACTGTAAACACAGAAACTAAT---- 885 Query 6565 CATATGCAAACAGTAATTTTAAGGAATACCTCAGACATGCAGAAGAGTATGACCTGCAGT 6624 ||| | |||| |||||||||||| || ||| || |||||||| |||||| Sbjct 886 --TATAAGGCCTCCAATTATAAGGAATACCTTAGGCATATGGAGGAGTATGATTTGCAGT 943 Query 6625 TTGTGTTTCAGTTATGCAAAATCAATTTAACTACAGATGTAATGACATATATACATTCTA 6684 | | ||||| | |||||||| | | || | || ||||| |||| |||||| | Sbjct 944 TCATTTTTCAACTGTGCAAAATAACACTTACCCCCGAGATAATGGCATACATACATAACA 1003 Query 6685 TGAGTTCTAGTATATTGGAACAGTGGAATTTTGGTCTTACACCACCGCCTTCAGGTACTT 6744 || | | | | | || | ||||| |||||| | | || || || || | | | Sbjct 1004 TGGATGCGCGGTTGCTTGAGGACTGGAACTTTGGTGTACCCCCGCCCCCGTCCGCCAGCT 1063 Query 6745 TAGAAGAAACATATAGATATGTTACTTCACAGGCCATTACATGTCAGCGTCCGCAACCTC 6804 | |||| || || || ||| | || || || || ||||||||| || ||| | Sbjct 1064 TGCAAGACACCTACAGGTATCTGCAGTCCCAAGCGATAACATGTCAGAAGCCCACACCCC 1123 Query 6805 CTAAGGAAACAGAGGACCCATATGGTAAAATGACATTTTGGGAGGTAGACCTTAAAGAAA 6864 ||||| | || || |||| | |||||||| ||||| || || || | |||| Sbjct 1124 CTAAGACCCCTACTGATCCCTATGCAACCATGACATTCTGGGATGTGGATCTCAGTGAAA 1183 Query 6865 AATTTTCTGCAGAATTAGATCAGTTTGCCTTAGGTAGAAAGTTTTTATTACA 6916 ||||| || | ||||| || || | || | |||||||| || || Sbjct 1184 GTTTTTCCATGGATCTGGATCAATTCCCCCTGGGACGCAAGTTTTTGTTGCA 1235 Score = 87.8 bits (96), Expect = 9e-14 Identities = 132/188 (70%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 5479 ACGTAAACGTTTGTCATAtttttttGCAGATG------TGGCGACCTACTGAGGCAAAGG 5532 |||||||||| || ||||| |||||||||| ||||| |||| ||| |||| Sbjct 7658 ACGTAAACGTGTGCACTATTTCTTTGCAGATGGCTATGTGGCGGCCTAATGAAAGCAAGG 7717 Query 5533 TATACCTGCCCCCTGTGTCTGTATCTAAAGTTGTAAGCACTGAAGAGTATGTAACACGCA 5592 |||||||||| || |||| || || || | || || || | ||||| || || | Sbjct 7718 TATACCTGCCTCCAACACCTGTCTCAAAGGTGCTCAGTACGGATGTCTATGTCACGCGGA 7777 Query 5593 CAAATATATATTATTATGCAGGTAGTACACGCTTGCTGGCAGTAGGACATCCCTATTATC 5652 | ||| | |||||| ||| || || | | | || ||||||| ||||| |||||| Sbjct 7778 CGAATGTTTATTATCATGGTGGGAGCTCTAGGCTCCTCACAGTAGGCCATCCATATTATT 7837 Query 5653 CTATAAAG 5660 |||||||| Sbjct 7838 CTATAAAG 7845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24588215155472