Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001595.1 Length=8027 Score E Sequences producing significant alignments: (Bits) Value seq8046 251 4e-63 >seq8046 Length=7925 Score = 251 bits (278), Expect = 4e-63 Identities = 701/1064 (66%), Gaps = 15/1064 (1%) Strand=Plus/Plus Query 1787 TACAACCACCTAAATTACAAAGTTCTGCAGCGGCTTTATTTTGGTTTAGATCAGGAATGG 1846 || ||||||| ||| || |||| | | || || || | |||| | || |||| Sbjct 3659 TAGAACCACCAAAACTAAGAAGTACACCTGCTGCCTTGTACTGGTACAAGACATCCATGG 3718 Query 1847 GTAATGGAAGTGAGGTGTCTGGCACAACACCGGAATGGATAGCTAAACAAACAATGTTGG 1906 ||||||| |||||||| | ||| ||||| |||||||||| | ||| ||| || | | Sbjct 3719 GTAATGGGAGTGAGGTCTATGGGGAGACACCAGAATGGATAGTGAGACAGACACTGATAG 3778 Query 1907 AACATAGTTTTGCTGAAGCACAGTTTAGTTTAACTCAGATGGTGCAGTGGGCATATGATA 1966 ||| ||| | | || | ||||| | ||| || |||||||||| |||||||| Sbjct 3779 GACACAGTATGGAGGATGAGCAGTTCAAATTATCTGTCATGGTGCAGTACGCATATGACC 3838 Query 1967 ATGGGCATA-CAGATGAATGTGAAATAGCATATTATTATGCACAAATAGCAGATATAGAT 2025 ||| |||| | || || | | | | |||| | | || ||||| | || || | || Sbjct 3839 ATGA-CATAACGGACGAGAGCGCACTGGCATTTGAGTACGCACAGCTGGCGGACGTGGAC 3897 Query 2026 GCAAATGCAGCAGCGTTTTTAAAAAGTAACAATCAAGCTAAATATGTTAGAGATTGTGCA 2085 || ||||| ||||| ||| |||| || ||| || || || || | | ||| | Sbjct 3898 GCCAATGCGGCAGCATTTCTAAACAGCAACTGCCAGGCCAAGTACCTAAAAGACGCGGTG 3957 Query 2086 GCTATGTGTAAGCATTATAGGTTGGCAGAAATGAGGCGGATGTCAATGGCAGACTGGATA 2145 | ||||| | || || | | ||||| | | | ||| ||| | ||||| Sbjct 3958 ACAATGTGCAGACACTACAAGCGTGCAGAGAGGGAACAAATGAGTATGAGCCAGTGGATC 4017 Query 2146 AAGCATAGAGGT-GAAAAATGT--GATGAAGGAGATTGGAAGCCTATAGTTAAACTACTA 2202 || |||||| | || || | || ||||||||||||||||||||||| || | || Sbjct 4018 AAATTTAGAGGGAGCAAGATATCAGAGGAAGGAGATTGGAAGCCTATAGTAAAGTTTTTA 4077 Query 2203 AGATATCAACATATAGACATAATTGTGTTTTTAGCTGCGTTGAAAAAATGGCTACATGGA 2262 || |||| |||| | | || | ||||| || || || || | || Sbjct 4078 AGGCATCAGGGGGTAGAGTTCGTGTCATTCCTTGCTGCCTTTAAGTCATTTTTAAAAGGT 4137 Query 2263 ATACCaaaaaaaaaTTGTATTTGTATTGT-TGGACCTCCAGATACTGGAAAGTCATGTTT 2321 | || || || ||||| || || || | ||||||| ||||||| || || |||| ||| Sbjct 4138 GTGCCCAAGAAGAATTGCATA-GTGTTTTATGGACCTGCAGATACAGGCAAATCATATTT 4196 Query 2322 TGGTATGAGTTTGATGCATTTTTTGCAAGGTACTATAATTTCATTTGTTAATTCGTGTAG 2381 | |||||| | |||| || | || || |||| |||| || ||||| |||| Sbjct 4197 CTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATATCATATGCCAATTCCAGTAG 4256 Query 2382 CCATTTTTGGTTGCAATCATTAGTGGACGCAAAAGTAGCTATGTTAGATGATGTGACTTC 2441 ||| |||||| |||| | |||| ||| || ||| | | || |||| ||| | Sbjct 4257 CCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGACTACTGGACGATGCGACGGC 4316 Query 2442 TGCATGCTGGGCCTATATGGATACACACATGAGAAATTTATTAGATGGAAACCCAACAAG 2501 |||||| | ||||| |||||| | | || || || ||||||||||||| || Sbjct 4317 CCAGTGCTGGACGTATATTGATACATATCTTAGGAACCTACTAGATGGAAACCCCTTCAG 4376 Query 2502 TATAGATAGAAAACATAAATCATTGGCTG-TGATTAAATGTCCTCCATTATTGTTAACAT 2560 |||||| || |||||||| | | |||| ||| ||||||||||||||| || ||||| Sbjct 4377 TATAGACAGGAAACATAAGACCCT-GCTGCAGATAAAATGTCCTCCATTAATGATAACAA 4435 Query 2561 CAAATATAAACATTAAACATGATTGCAAATATCAATATTTACAGAGTAGAGTGACAGTGT 2620 | || ||||| | | | || || || | ||||| | || ||||| ||| ||| Sbjct 4436 CCAACATAAATCCTCTAGAGGAGGACAGATGGAAGTATTTGCGCAGCAGAGTAACACTGT 4495 Query 2621 TTGAATTTCCAAATCCATTTCCATTTGACAGCAACGGAAATGCTGTGTATGAATTAAGTG 2680 || | ||| | || |||||||| || | ||| || | | | || ||| | Sbjct 4496 TTAAGTTTACCAACCCATTTCCCTTCGCAAGCCCAGGGGAGCCCCTATACCCTATAAATA 4555 Query 2681 ATGCAAATTGGAACTCCTTTTTTAAAAGGTTGGCGTCCAGTTTAGAGCT--GCAGACAAC 2738 ||||||| ||||| | |||||| |||||| | |||| | |||| || ||| | | Sbjct 4556 ATGCAAACTGGAAATGCTTTTTCCAAAGGTCGTGGTCCCGCCTAGACCTAAACAGTCCAG 4615 Query 2739 AG----AGGACGAGGATGGAGAAACTAGCCAGGCGCCTAGATTTGTGCCAGGAACAGTTG 2794 || |||| || ||||| | ||| || || || ||||| ||||||||| |||| Sbjct 4616 AGGATCAGGAAGACAATGGAAACACTGGCGAGCCGTTTAGATGCGTGCCAGGAGACGTTG 4675 Query 2795 TTAGAACTTTATGAACAAGACAGCAAACAGCTACAGCACCATAT 2838 ||||||| |||||| |||| ||||| | || || |||| || Sbjct 4676 CTAGAACTGTATGAAAAAGATAGCAACAAACTTGAGGACCAAAT 4719 Score = 194 bits (214), Expect = 9e-46 Identities = 659/1017 (65%), Gaps = 30/1017 (3%) Strand=Plus/Plus Query 6071 GAAACCCAACGCCTTGTATGGGCCTGTGTTGGTGTTGAGGTCGGTCGAGGTCAGCCATTA 6130 || ||||| || || | ||||||||||| || |||||||| ||||| || ||||| | Sbjct 118 GACACCCAGCGTCTGCTGTGGGCCTGTGTCGGAGTTGAGGTGGGTCGTGGCCAGCCTCTG 177 Query 6131 GGTGTAGGCATTAGTGGTCATCCATACTTTAATAAAGATGAAGATGTGGAAAACTCGTCT 6190 ||||| || || ||||| || |||| ||| | | || ||| ||||| | | Sbjct 178 GGTGTGGGGATATCCGGTCACCCTTACTATAACAGACTGGATGATACTGAAAATGCA-CA 236 Query 6191 GTATATGGA-ACAGTACCTGGTCAGGACAGCAGAGAAAATGTTGCTATGGATTATAAACA 6249 || || |||| ||| | | | || ||||| || | | |||||||||||||| Sbjct 237 CAATCCCGACACAG---CTGATGATGGGAGG-GAGAATATAT--CCATGGATTATAAACA 290 Query 6250 AACTCAGTTATGTATTGTAGGCTGTACTCCTCCTATTGGAGAATATTGGGGTATGGGTAC 6309 || ||| | | |||| | || || | |||||||| || ||| ||||| | ||| || Sbjct 291 GACACAGCTGTTTATTTTGGGATGCAAGCCTCCTATAGGTGAACATTGGTCCAAGGGCAC 350 Query 6310 ACCGTGCAATGCTTCTAAAGTGTCTCCTGGTGACTGTCCTGTACTAGAATTAAAAAGTGA 6369 | |||| | || | || || ||||||||||||| || | || | || Sbjct 351 TACCTGCAGCGGGTC--ATCTG-CTGTTGGTGACTGTCCTCCCCTTCAGTTTACAAACAC 407 Query 6370 AGTTATTGAGGATGGCGACATGGTTGATGCAGGCTTTGGTGCCATGGATTTTGCATCATT 6429 |||||||||||| || |||||||| | || || || ||| |||||||||| | | Sbjct 408 CACTATTGAGGATGGGGATATGGTTGAAACCGGGTTCGGGGCCCTGGATTTTGCCGCTCT 467 Query 6430 GCAGGCCAATAAAAGCGATGTGCCTTTAGATTTATGTACATCTATTAGTAAATACCCAGA 6489 ||| |||| ||| ||||| || | ||| | ||||| || ||||||| || || Sbjct 468 ACAGTCCAACAAATCTGATGTCCCCCTGGATATTTGTACTAACATATGTAAATATCCGGA 527 Query 6490 TTATTTAGGAATGGCTGCAGAACCGTATGGTAATAGTTTAtttttttttCTTAGAAGAGA 6549 ||| | ||||||||| || || ||||| || | | || |||| || | || || Sbjct 528 CTATCTGAAAATGGCTGCTGACCCCTATGGCGATTCTATGTTCTTTTCCCTGCGCAGGGA 587 Query 6550 ACAAATGTTTGTTAGGCACTTTTTTAATAGGGCAGGAACTACTGGAGACAGTGTTCCAAA 6609 || ||||| |||| ||||||||| ||| || | | || ||| | || | Sbjct 588 GCAGATGTTCACCCGGCATTTTTTTAATCGGGGTGGGTCGATGGGTGACGCCCTCCCGGA 647 Query 6610 TGATTTATATATAACAGGTTCATCTAATCGCGCTTCTATTGCAGGCAG---TATTTATTA 6666 || ||||| | | | |||| | || | | || || | |||| Sbjct 648 GGAGCTATATGTCAAAAGTTC------TACCGTCCAGACCCCCGGTAGTTATGTTTACAC 701 Query 6667 TTCCACACCAAGTGGCTCTCTAGTTACCTCTGATTCTCAGATTTTTAATAAACCTTTGTG 6726 ||||| || ||||||||| | || ||||||| ||| | ||||| || |||| || Sbjct 702 CTCCACTCCCAGTGGCTCTATGGTATCCTCTGAACAGCAGTTATTTAACAAGCCTTACTG 761 Query 6727 GATACAAAAGGCCCAGGGTCATAACAATGGCATTTGTTTTGGCAATCAGTTATTTGTTAC 6786 | | | || ||||||||| |||||||||||||| || | ||||||| | | || | || Sbjct 762 GCTGCGAAGGGCCCAGGGACATAACAATGGCATGTGCTGGGGCAATCGGGTCTTCCTGAC 821 Query 6787 AGTTGTAGATACTACTCGTAGCACAAATTTAACATTATGTGCTGCTACACAATCGCCCAC 6846 ||| || || || || || ||||||||| | | || ||||| || | | ||| Sbjct 822 AGTGGTGGACACCACGCGCAGCACAAATGTCTCTTTGTGTGCCACTGTAAA------CAC 875 Query 6847 ACCAACACCATATGACAATAGTAAGTTTAAAGAATATTTACGTCATGGGGAAGAGTTTGA 6906 | ||| ||| | || | ||| ||||| | | ||| ||| |||| ||| Sbjct 876 AGAAACTAATTATAAGGCCTCCAATTATAAGGAATACCTTAGGCATATGGAGGAGTATGA 935 Query 6907 TTTACAGTTTATTTTTCAGTTATGTGTTATTACATTAAATGCAGAGGTTATGACATATAT 6966 ||| ||||| |||||||| | || || ||| | | | ||| | ||| |||| || Sbjct 936 TTTGCAGTTCATTTTTCAACTGTGCAAAATAACACTTACCCCCGAGATAATGGCATACAT 995 Query 6967 ACATGCTATGGATTCTTCCTTATTAGATGATTGGAATTTTAAAATTGGTCCTCCAGCGTC 7026 |||| |||||| | || | || || ||||| ||| | || || |||| Sbjct 996 ACATAACATGGATGCGCGGTTGCTTGAGGACTGGAACTTTGGTGTACCCCCGCCCCCGTC 1055 Query 7027 TGCAACCTTGGAAGATACTTATAGGTTTCTTACCAAT--AAAGCCATAGCATGTCAG 7081 || | |||| |||| || || |||| ||| || | |||| ||| |||||||| Sbjct 1056 CGCCAGCTTGCAAGACACCTACAGGTATCT--GCAGTCCCAAGCGATAACATGTCAG 1110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25560612372496