Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1592 111 1e-19 >seq1592 Length=29089 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| |||||| ||||||||||| || || || | || ||| | ||||||||||||| Sbjct 210 ATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTG 269 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 |||||||| |||| | ||||||||| ||| || | |||||| ||||| || || Sbjct 270 CTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTGTCTTGAATTTT 329 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 ||| || | ||| ||||| | ||| ||||| ||||| || || || || Sbjct 330 GGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGTAATAGTTTTTCCCGT 389 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 || |||||||| || |||||||| Sbjct 390 CAAGGTTTTGACGAAAATTTGCAT 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422069796163664