Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq34550 163 6e-36 >seq34550 Length=593 Score = 163 bits (180), Expect = 6e-36 Identities = 246/347 (71%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 26516 TTGGTAAGCATCTTGCCGTTCCTCGCTGGCAGGAT-ACATGTGATTATTATAATCAGATG 26574 |||| ||| || |||| ||||||||| || | || || |||| ||||||||||||| Sbjct 347 TTGGGGAGCGCCTCGCCGCCCCTCGCTGG-AGAAGCACCTGCGATTTTTATAATCAGATG 289 Query 26575 ATGGAGCGCGAACGGTTAACGGTTTGCTTCCATGCTCAGTTAAAACAGCGTCACGCAACG 26634 ||||||||||| || | || | || |||||||| |||||||||||||| || || Sbjct 288 ATGGAGCGCGAGCGCCTGACCATCTGTTTCCATGCGCAGTTAAAACAGCGGCATGCTGTT 229 Query 26635 ATGTGTTTTGAAGAAATGAACGACGTCGAACGTGAACGACTGGTATGTGCAATTGATGAA 26694 ||| | || || |||||||| ||| ||| || || || || || || || ||||||||| Sbjct 228 ATGCGATTAGAGGAAATGAATGACAGCGAGCGCGAGCGTCTTGTGTGCGCCATTGATGAA 169 Query 26695 TTGCGTGGTGCATTCTCAAAACGCCGTCAGGTTGGCGCAAGTGAGTATGCATATATTAGT 26754 | || | || ||| | | ||| || || ||| | | || || ||| | Sbjct 168 CTTCGCAGCGCTTTCGCTACTTATCGTAAGCACGGTATCAGTAAATCTGGATTCATTGGC 109 Query 26755 TTTTTAACAGTCAGTCAGCGTCGTACTTTATTTATGCATGCCGGATTGACTGAAAAAGAA 26814 |||||| | || || || || |||||||| |||||||||| | ||||| || Sbjct 108 CGATTAACAATAAGCCAACGCCGCACTTTATTCCTGCATGCCGGGCTAACTGAGGTCGAG 49 Query 26815 TTCAACCAGCCATACTGGCGAATTAATGAAGAGTCATGTTACTGGCG 26861 || || ||||| |||||||| ||| |||| ||||| ||| | ||||| Sbjct 48 TTTAATCAGCCGTACTGGCGGATTGATGATGAGTCCTGTAAATGGCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107329071587640