Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_002232.1 Length=7565 Score E Sequences producing significant alignments: (Bits) Value seq8046 100 1e-17 >seq8046 Length=7925 Score = 100 bits (110), Expect = 1e-17 Identities = 162/230 (70%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 2429 ATTTTTGAAAGGGACACCTAAAAAGAATTGCATTGTGATTTACGGTCCACCTAATAGTGG 2488 |||||| ||||| || || ||||||||||| ||| |||| || || | ||| || Sbjct 4125 ATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGCAGATACAGG 4184 Query 2489 CAAATCATATTTTTGCATGAGCCTGCTAAGACTGATGGGAGGGAAGGTAATTTCCTTTGC 2548 |||||||||||| |||||||| || | | | || || ||||| || | ||| Sbjct 4185 CAAATCATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATATCATATGC 4244 Query 2549 AAATAGTAAAAGCCATTTTTGGCTACAGCCACTAGCAGATGCTAAAATAGGGCTGTTGGA 2608 ||| | ||||| |||||||| ||||| |||| || ||| ||||| || |||| Sbjct 4245 CAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGACTACTGGA 4304 Query 2609 CGATGCTACAAAGCCC--TGTTGGGATTTTATTGATACATAT-TTAAGAA 2655 |||||| || |||| || ||| | ||||||||||||| ||| ||| Sbjct 4305 CGATGCGAC--GGCCCAGTGCTGGACGTATATTGATACATATCTTAGGAA 4352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24082824496624