Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5215 91.5 3e-13 >seq5215 Length=12414 Score = 91.5 bits (100), Expect = 3e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 |||||||| |||||| || | || ||||||||||||||| |||||| | || |||||| Sbjct 1991 TGTCCGCCATTCAAGATCATCATATTGGACGAGGCGGACAGCATGACCGGCGCCGCGCAA 1932 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 | || || || |||| ||||| | | | | | ||||| |||||||| || ||| Sbjct 1931 ACAGCGCTTCGTCGAATTATGGAAAAGGAGGCGCATAGCACGCGCTTTTGCCTAGTATGC 1872 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || ||| | ||| || ||| ||| | || || || ||| |||| || || |||| Sbjct 1871 AATTACCTATCGCGAATTATCAAGCCGATAGCGTCGCGCTGCACCAAATTCCGGTTCA 1814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073260064111872