Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq36678 113 1e-20 >seq36678 Length=505 Score = 113 bits (124), Expect = 1e-20 Identities = 170/239 (71%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 9610 TTGCTGATGCATTAGGGATCAATGAATCGCAAATTTCGCGATGGAAAGACAGCTTTATCC 9669 |||| | |||| |||| | || ||| ||||| | || |||||||| |||||| Sbjct 425 TTGCAGCTGCAGTAGGTGTTAACCCATCTCAAATCACACGCTGGAAAGAGTCTCTTATCC 366 Query 9670 CAAAGATGGCCATGCTTCTGGCTGTGCTGGAGTGGGGTGTTGAAGACGAGGAGTTGGCGG 9729 | ||||| ||| | ||||| || |||||||||||| | |||||||| || |||||| Sbjct 365 CTCGCATGGCGATGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGG 306 Query 9730 AACTGGCTAAGAAAGTAGCCAGAATGCTG---ACAAAAGAAAAAGCCCCGAAGAACGGCG 9786 | |||||||| | || || ||| |||||||||| |||||| ||| | | Sbjct 305 AGTTGGCTAAGCGCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCG--GAA-GTTG 249 Query 9787 AATTCTTCGAGGCCTAATGTAGAAAGACTGGATCAATCCACGGGAGTAATTATGACAAA 9845 | |||||||| | || ||| ||||||||||| ||| |||||||||||| |||| Sbjct 248 CAGCTTTCGAGGCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122375292799032