Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq942 95.1 2e-14 >seq942 Length=37279 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 35234 ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGC 35293 || ||||| | | | |||||| ||| | | || |||||| | | ||||| |||| || Sbjct 15241 ACAACCAAAACAGTATTCTGGCGAGCAATAGTTGAAGAATTATTATGGTTTATCAAAGGA 15300 Query 35294 AATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 ||| | ||||||||||| | | ||| | || || || ||| | | ||||| ||| Sbjct 15301 TCAACAAATTCCAAAGAATTGACAGACAAGGATATTCATATTTGGGATGAAAATGGTTCG 15360 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 || | || || || | | || || ||| |||| || || |||||||| || || Sbjct 15361 CGTGCCTTCTTAGATTCTTGTGGTTTCACCGACAGAGAGGAAGGTGATTTGGGGCCTGTC 15420 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 || |||||||||||| | || |||||||| ||||| Sbjct 15421 TATGGATTCCAATGGAGACACTTTGGTGCCGAATA 15455 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583 ||| |||||||| | || || ||| | || |||||||| | ||| ||| ||||| Sbjct 15659 TCCGGATGATAGGCGTATTATAATGTCCGCTTGGAATCCAGTCGATATTCCAAAAATGGC 15718 Query 35584 TCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGC-C 35642 | || || || ||| | | | ||||||||||| ||| || |||||||| ||| | Sbjct 15719 ATTACCACCGTGTCACGTTATGGTACAATTTTATGTAAATAACGGTGAATTGTC-TGCGC 15777 Query 35643 AGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACT 35702 || | ||||| |||||| |||| | || || || ||||| || || || || ||||| | Sbjct 15778 AGCTTTATCAAAGAAGCGCAGATATGGGTTTAGGAGTGCCATTTAACATAGCGTCATATT 15837 Query 35703 CTCTTCTGACTCATCTGATGGC 35724 | | ||||| || |||| || Sbjct 15838 CCTTATTGACTTATATGATCGC 15859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989117360427820