Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_003748.1 Length=7610 Score E Sequences producing significant alignments: (Bits) Value seq8046 102 4e-18 >seq8046 Length=7925 Score = 102 bits (112), Expect = 4e-18 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 1902 TGGCAGCCTATTGTAAACTTTTTGAAGTATCAGGGGGTGGCCATGGTAACATTTATCAAT 1961 ||| ||||||| ||||| ||||| | | |||||||||| | | || |||| | | Sbjct 4054 TGGAAGCCTATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTGTCATTCCTTGCT 4113 Query 1962 GCACTCAAATCTTTTTTGAAGGGCACACCAAAGAAAAATTGTTTGGTGATATGGGGGCCA 2021 || | || || ||||| || || || ||||| ||||| | ||| | | || || Sbjct 4114 GCCTTTAAGTCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCT 4173 Query 2022 CCTAACACAGGAAAGTCGTGGTTCTGCATGAGCCTTATGCACTTCCTGGGGGGTAGGGTC 2081 | | ||||| || || | ||||||||||| ||| |||| ||||| || || || Sbjct 4174 GCAGATACAGGCAAATCATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTA 4233 Query 2082 CTGTCACATGTGAACTCGAACAGCCATTTTTGGCTGCAGCCTCTAGGGGACGCTAAAGTG 2141 | ||| ||| || || | ||||| |||||||||||||| ||| ||| ||| | Sbjct 4234 ATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATA 4293 Query 2142 GCACTGCTGGATGATGCCACG 2162 | ||| ||||| ||||| ||| Sbjct 4294 GGACTACTGGACGATGCGACG 4314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24226764874144