Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq35391 84.2 4e-11 seq7726 84.2 4e-11 >seq35391 Length=557 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 272869 ATATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTA 272928 || |||||| ||| | || ||||||| |||||||||||||||||||||||||||||| Sbjct 113 ATTTGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCTA 172 Query 272929 ACCAACTGAGCTA 272941 ||| ||||||||| Sbjct 173 ACC-ACTGAGCTA 184 >seq7726 Length=8327 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 271737 AATATGGCTCCGTGACCTGGACTCGAACCAGGGACCCAGTGATTAACAGTCACTTGCTCT 271796 || |||||||| | | ||||||||||| | ||||||| ||||||||||| |||||||| Sbjct 8000 AAAATGGCTCCCGAAGCAGGACTCGAACCTGCGACCCAGCGATTAACAGTCGCTTGCTCT 7941 Query 271797 ACCGACTGAGCTAT 271810 ||| |||||||||| Sbjct 7940 ACCAACTGAGCTAT 7927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896528162384960