Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq34550 168 1e-37 >seq34550 Length=593 Score = 168 bits (186), Expect = 1e-37 Identities = 247/347 (71%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 25322 TTGGTAAGCATCTTGCCGTCCCTCGCTGGCAGGAT-ACATGTGATTATTATAATCAGATG 25380 |||| ||| || |||| |||||||||| || | || || |||| ||||||||||||| Sbjct 347 TTGGGGAGCGCCTCGCCGCCCCTCGCTGG-AGAAGCACCTGCGATTTTTATAATCAGATG 289 Query 25381 ATGGAGCGCGAACGGTTAACGGTTTGCTTTCATGCGCAGTTAAAACAGCGTCACGCAACG 25440 ||||||||||| || | || | || || |||||||||||||||||||| || || Sbjct 288 ATGGAGCGCGAGCGCCTGACCATCTGTTTCCATGCGCAGTTAAAACAGCGGCATGCTGTT 229 Query 25441 ATGCGTTTTGAAGAAATGAACGACGTCGAACCCGAACGGCTGGTTTGTGCAATTGATGAA 25500 ||||| || || |||||||| ||| ||| | ||| || || || || || ||||||||| Sbjct 228 ATGCGATTAGAGGAAATGAATGACAGCGAGCGCGAGCGTCTTGTGTGCGCCATTGATGAA 169 Query 25501 TTGCGTGGGGCATTCTCAAAACGCCGTCAGGTTGGCGCAAGTGAGTATGCATATATTAGT 25560 | || | || ||| | | ||| || || ||| | | || || ||| | Sbjct 168 CTTCGCAGCGCTTTCGCTACTTATCGTAAGCACGGTATCAGTAAATCTGGATTCATTGGC 109 Query 25561 TTTTTAACAGTCAGTCAGCGTCGTACTTTATTTATGCATGCCGGATTGACTGAAAAAGAA 25620 |||||| | || || || || |||||||| |||||||||| | ||||| || Sbjct 108 CGATTAACAATAAGCCAACGCCGCACTTTATTCCTGCATGCCGGGCTAACTGAGGTCGAG 49 Query 25621 TTCAACCAGCCATACTGGCGAATTAATGAAGAATCATGTTACTGGCG 25667 || || ||||| |||||||| ||| |||| || || ||| | ||||| Sbjct 48 TTTAATCAGCCGTACTGGCGGATTGATGATGAGTCCTGTAAATGGCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98165078439120