Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq34550 172 1e-38 >seq34550 Length=593 Score = 172 bits (190), Expect = 1e-38 Identities = 248/347 (71%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 24708 TTGGTAAGCATCTGGCCGTCCCTCGCTGGCAGGAG-ACATGCGATTATTATAATCAGATG 24766 |||| ||| || |||| |||||||||| || || || ||||||| ||||||||||||| Sbjct 347 TTGGGGAGCGCCTCGCCGCCCCTCGCTGG-AGAAGCACCTGCGATTTTTATAATCAGATG 289 Query 24767 ATGGAACGCGAACGGCTAACGGTTTGCTTTCATGCGCAGTTAAAACAACGTCACGCAACG 24826 ||||| ||||| || || || | || || ||||||||||||||||| || || || Sbjct 288 ATGGAGCGCGAGCGCCTGACCATCTGTTTCCATGCGCAGTTAAAACAGCGGCATGCTGTT 229 Query 24827 ATGCGTTTTGAAGAAATGAACGACGTCGAACGTGAACGGCTGGTTTGTGCAATTGATGAA 24886 ||||| || || |||||||| ||| ||| || || || || || || || ||||||||| Sbjct 228 ATGCGATTAGAGGAAATGAATGACAGCGAGCGCGAGCGTCTTGTGTGCGCCATTGATGAA 169 Query 24887 TTGCGTGGGGCATTCTCAAAACGCCGTCAGGTTGGCGCAAGTGAGTATGCATATATTAGT 24946 | || | || ||| | | ||| || || ||| | | || || ||| | Sbjct 168 CTTCGCAGCGCTTTCGCTACTTATCGTAAGCACGGTATCAGTAAATCTGGATTCATTGGC 109 Query 24947 TTTTTAACAGTCAGTCAGCGCCGTACTTTATTTATGCACGCACGACTGACAGAAAAAGAA 25006 |||||| | || || ||||| |||||||| |||| || | || || || || Sbjct 108 CGATTAACAATAAGCCAACGCCGCACTTTATTCCTGCATGCCGGGCTAACTGAGGTCGAG 49 Query 25007 TTTAACCAGCCATACTGGCGAATTAATGAAGAGTCATGTTACTGGCG 25053 ||||| ||||| |||||||| ||| |||| ||||| ||| | ||||| Sbjct 48 TTTAATCAGCCGTACTGGCGGATTGATGATGAGTCCTGTAAATGGCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104421542871408