Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq13651 170 6e-38 >seq13651 Length=3921 Score = 170 bits (188), Expect = 6e-38 Identities = 346/514 (67%), Gaps = 0/514 (0%) Strand=Plus/Minus Query 42974 AAATTGAGCGCGGCAATTCTGGCGCTGATCGCTACTGGAGCTTCTGCACCAGTAATGATG 43033 ||| | ||||| | ||| ||||| |||||||| | || || || || || || |||||| Sbjct 3525 AAACTCAGCGCCGTAATGCTGGCCCTGATCGCGGCCGGCGCATCGGCTCCTGTCATGATG 3466 Query 43034 TCTCAATTTCAGAAAGAAAAAGAAGGCACAAGCCTGATTGCTTATCCTGACAACGGCGGT 43093 || || |||||| |||| |||||||| |||||| || || | ||| | || Sbjct 3465 TCGCAGTTTCAGGAAGAGAAAGAAGGTCAGCGCCTGACCGCATACCAGGACGGTGTTGGA 3406 Query 43094 GTCTGGACTATTTGCGGTGGTGTTACGCGCGTGGACGGAAAACCAGTCGTTAAGGGCATG 43153 ||||||| |||||||| || || ||| || |||| | || || ||||| | Sbjct 3405 ATCTGGACAATTTGCGGCGGCGTGACGATGGTCAACGGCCAGAAGGTTGTGAAGGGGCAG 3346 Query 43154 AAGCTCACTCAAACACAATGCAACTCCATCGACAAGGCAGAGCAAGCCAAAGCGCTGTTA 43213 || || || ||||| || ||| |||||||| || || || Sbjct 3345 CGCCTGACCGCCGAGCAGTGCAAGCAGATTGACGCAGCAGAGCAGAAAAAGGCTCTCGAC 3286 Query 43214 TGGGTGCAGAAGAATGTCTACGTTCCTCTGACAGAGCCGCAAAAGGTCGGGATCGCTTCA 43273 ||||| | || ||| | || | ||||| || || ||||| || || ||||| ||| Sbjct 3285 TGGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCTCAAAAAGTTGGTATCGCCTCA 3226 Query 43274 TTCTGCCCTTGGAACATTGGCCCGAGTAAATGTTTCACTTCTACGTTCTATCGAAAATTA 43333 ||||| || |||||||| ||||| | ||||| ||||| || || || || || | Sbjct 3225 TTCTGTCCGTGGAACATCGGCCCTGGAAAATGCTTCACCTCCACCTTTTACAAGAAGCTG 3166 Query 43334 AATTTAGGCGACCGCTTAGGCGCGTGCGCTGAAATTAAACGCTGGATACATGACGGCGGG 43393 || ||||||||| | || || ||| ||||| ||||||||| | |||| || Sbjct 3165 AACGCCGGCGACCGCATTGGTGCCTGCCGAGAAATCCGCCGCTGGATATACGACGCTGGC 3106 Query 43394 AAAGATTGCCGTATTCGCTCCAATAACTGTTACGGGCAGATAGAGCGCCGTGAACAAGAA 43453 ||||||||| || ||||| |||||||| ||||||||||| | || || || || ||| Sbjct 3105 CGAGATTGCCGCATCCGCTCGAATAACTGCTACGGGCAGATCGTACGGCGCGATCAGGAA 3046 Query 43454 AGCGAATTAACGTGTTGGGGGCTGGATGAATAAA 43487 |||| || | || ||||| |||| ||| || Sbjct 3045 GCCGAACTAGCTTGCTGGGGATTGGACAAATGAA 3012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148098445643848