Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq35768 91.5 1e-13 >seq35768 Length=540 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 27655 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGTG 27714 ||||||||| ||||| || |||||| |||| ||||| | ||| || || ||||| | Sbjct 393 ATTACATCGTTTGAGTGAAGGTACGAGTAATGACGTCCTGCTGTTGCTCTTTGGTCAGCG 452 Query 27715 CGTTAAAACGCACAGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGAT 27774 ||| || ||||| ||||| || || || ||||| || | ||||||||||| ||||||| Sbjct 453 AGTTGAAGCGCACGGCGTAACCGGAGACGCGGATGGTCAGCTGAGGGTATTTCTCAGGAT 512 Query 27775 GTT 27777 || Sbjct 513 TTT 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389300501385884