Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2779 167 2e-36 seq1592 129 5e-25 seq12857 109 5e-19 seq121 98.7 9e-16 seq1483 84.2 2e-11 >seq2779 Length=20704 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | |||||| || ||||| | |||||||||||||| | ||||||||| Sbjct 8149 CCTCCGCGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAA 8208 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| |||||||| || ||| |||| || | | ||||||||| |||||| Sbjct 8209 AGAGTTCTGCCATCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGA 8268 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||||||||| | |||||||| || ||| ||| ||||| | ||||| Sbjct 8269 ATTCCTTCTTTGTCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACT 8328 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || |||||||| || |||||||||||||||||||||||||| Sbjct 8329 TCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCAT 8375 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||| | | |||| |||| || | || |||||||| || | || ||||| Sbjct 8601 CATTCCTCCACGAAGACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATC 8660 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | | ||| || ||| ||||||||||||||| ||||||| | | |||||||| || Sbjct 8661 GGAAAGAGTTCTGCCATCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGG 8720 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||||| ||||| ||||| | ||| || || || || | | |||||||| || Sbjct 8721 TGGAATGCCTTCCTTGTCTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTC 8780 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || |||| ||||||||||| ||||| ||||||||||| ||||| |||||| Sbjct 8781 TACCTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATTTGCATG 8832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||| | | |||| |||| || | || |||||||| || | || ||||| Sbjct 8373 CATTCCTCCACGAAGACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATC 8432 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | | ||| || ||| || || ||||| || | || || | | |||||||| || Sbjct 8433 GGAAAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGG 8492 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||||| || |||||||| | ||||| ||||| || | | || || | || Sbjct 8493 GGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTC 8552 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||| ||||||||||| || || ||||| || |||||||||||||| Sbjct 8553 AACTTCAAGGGTGATGGTTTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 8603 >seq1592 Length=29089 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||||||| || || || || | ||| || ||| | ||| | || || Sbjct 433 ACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCGGAAAGCGTGCGGCCGTCTTCA 492 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||||||||| ||||||| ||||||||||||||||| || || |||||||| || | | Sbjct 493 AGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGGGGATGCCTTCTTTATCCTGA 552 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| || ||||| ||| ||||| | || || || | |||||||| ||| Sbjct 553 ATTTTCGCTTTGACATTCTCGATCGTGTCTGAAGCTTCAACCTCCAATGTGATGGTCTTT 612 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| |||||||||||||| Sbjct 613 CCCGTCAAGGTTTTGACAAAGATCTGCAT 641 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | |||||| || || |||| ||| ||||||||||| | || |||||| | Sbjct 187 CCTCCGCGAAGTCGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGAC 246 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||||||||||| || || | || || ||||| |||||||| ||||| Sbjct 247 AAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGG 306 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||||||||| | |||||| || ||||| ||| || || | || || Sbjct 307 ATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACT 366 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||||||| || | ||||| || || || ||||| Sbjct 367 TCCAAAGTAATAGTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856 |||| || | ||| |||||||| || | || |||||| || || || | || | Sbjct 661 ACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGACAAGGTACGTCCG--TCTT 718 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | |||||||| ||| | || || || | ||||| || || |||||||| |||||||| | Sbjct 719 CAAGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCCTCTTTGTCCT 778 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || ||||| ||| ||| |||||||| | || || || | || || |||| Sbjct 779 GAATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAACTTCGAGAGTTATAGTTT 838 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||||| | || |||||||| ||||||||| Sbjct 839 TTCCAGTTAATGTCTTCACAAAAATCTGCATG 870 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | || || ||||| |||||||| |||||||| ||||||||| Sbjct 31 TCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTG 90 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| || ||||| | | || |||| ||||| || | |||||| Sbjct 91 TCTTGAATTTTGGCTTTGACATTCTCAATCGTATCAGATGCCTCGACTTCCAATGTGATG 150 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || ||||| || || || |||||||| Sbjct 151 GTTTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 185 >seq12857 Length=4317 Score = 109 bits (120), Expect = 5e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || || ||||| |||||||| || | || ||||| | || || || ||| | Sbjct 4064 ACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCAG--AAAGCGTGCGACCATCTT 4121 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| ||||||| ||||| |||||||| ||||| |||||||| || || | Sbjct 4122 CGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGGATACCTTCCTTATCCT 4181 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| || ||||| | | || |||| ||||| || | |||||||||| Sbjct 4182 GAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCGACTTCCAATGTGATGGTTT 4241 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || ||||| || || || |||||||| Sbjct 4242 TACCGGTGAGAGTCTTGACGAAAATCTGCAT 4272 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || |||| |||||||||||| || | || ||||| | || || || ||| | Sbjct 3836 ACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAG--AAAGCGTGCGACCATCTT 3893 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| |||| || ||||| || ||||| ||||| || ||||||||||| | Sbjct 3894 CAAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCTTTGTCCT 3953 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| || ||||| | | || || | ||||| || | |||||||| | Sbjct 3954 GAATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTGATGGTCT 4013 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || ||||| || || || |||||||| Sbjct 4014 TACCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCTCCAGCTGTTTTC 94868 |||||||| || || | |||||||| || ||| || | ||||| ||||| || | Sbjct 3620 GTAGATTCTTTCTGAATATTATAATCTGACAAAGTACGTCCG--TCCTCGAGCTGCTTGC 3677 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | | || || | |||||||||||| |||||||| || |||||||| | |||||| |||| Sbjct 3678 CCGCGAAAATCAGTCTTTGCTGATCAGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCT 3737 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | || ||| || || | || || || | ||||| |||||||| || | || Sbjct 3738 TTACATTCTCGATCGTATCCGAAGCCTCTACCTCCAAAGTGATAGTTTTTCCTGTCAAAG 3797 Query 94989 TTTTCACAAAGATCTGCAT 95007 |||| || || || ||||| Sbjct 3798 TTTTGACGAAAATTTGCAT 3816 >seq121 Length=74473 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||||||||| ||||||| | || ||||||||||| ||||| || ||||| Sbjct 8155 ATCTTCCAGCTGTTTTCCAGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTT 8214 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || || || || ||| || |||| | || || || | || || Sbjct 8215 ATCCTGAATCTTGGCTTTCACATTTTCGATGGTATCAGAGGCTTCTACCTCGAGAGTAAT 8274 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 |||||| ||||| || ||||| || || ||||||||| Sbjct 8275 GGTTTTACCAGTGAGGGTTTTGACGAAAATCTGCATG 8311 >seq1483 Length=30179 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| ||| |||| ||||||||||| |||||||| || || | || || ||| Sbjct 23249 CCACCTCGCAAGCGCAGTACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAGTCGGAT 23308 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| || || || ||||||| ||||||||||||||||| ||| Sbjct 23309 AAAGTCCTACCATCTTCCAATTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGCGGA 23368 Query 94901 ATACCT 94906 || ||| Sbjct 23369 ATTCCT 23374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448084963633440