Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq36678 102 2e-17 >seq36678 Length=505 Score = 102 bits (112), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 12/230 (5%) Strand=Plus/Minus Query 37293 TAGGCATTAACGAATCTCAAATTTCACGATGGAAAGGCGATTTCATTCCAAAGATGGGGA 37352 |||| ||||| ||||||||| |||| ||||||| | | || || |||| || Sbjct 413 TAGGTGTTAACCCATCTCAAATCACACGCTGGAAAGAGTCTCTTATCCCTCGCATGGCGA 354 Query 37353 TGTTATTGGCGGTTCTGGAGTGGGGTGTCGAGGATGAGGAGTTGGCAGAACTGGCAAAG- 37411 ||||| |||| ||||||||||||||| | || || || || |||| || |||| ||| Sbjct 353 TGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGGAGTTGGCTAAGC 294 Query 37412 --AAAGTTGCGCATCTGCTGACAAAAGAAAA-GCCCC--AAGACTGCGGGAACAGTTTTG 37466 | || ||||| |||||||||| ||||| ||| ||| | ||| | Sbjct 293 GCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCGGAAG-TTGCAG-----CTTTCG 240 Query 37467 AGGCCTGATGTAGAAGGACTGGATCAATCCACAGGAGTAATTATGCCAAA 37516 |||| |||| ||| ||||||||||| |||||||||||||||| |||| Sbjct 239 AGGCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149892861056176