Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq942 104 6e-17 >seq942 Length=37279 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 111353 AATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGC 111412 ||| || |||||| | | |||||||| ||| |||||| | || ||| | ||| Sbjct 15267 AATAGTTGAAGAATTATTATGGTTTATCAAAGGATCAACAAATTCCAAAGAATTGACAGA 15326 Query 111413 AAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCT 111472 || || | | |||||||||| |||||| || |||| ||| ||||||| |||| | Sbjct 15327 CAAGGATATTCATATTTGGGATGAAAATGGTTCGCGTGCCTTCTTAGATTCTTGTGGTTT 15386 Query 111473 TGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532 ||||| || ||||||||| | || || || || ||||| |||||| | |||||||| Sbjct 15387 CACCGACAGAGAGGAAGGTGATTTGGGGCCTGTCTATGGATTCCAATGGAGACACTTTGG 15446 Query 111533 TGCAGACTACAA 111544 ||| || ||||| Sbjct 15447 TGCCGAATACAA 15458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302739001980728