Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_008032.1 Length=7542 Score E Sequences producing significant alignments: (Bits) Value seq8046 84.2 1e-12 >seq8046 Length=7925 Score = 84.2 bits (92), Expect = 1e-12 Identities = 203/302 (67%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 1875 GCCTaaaaaaaaCTGCTTAGTAATTTGTGGGGCCCCTAACACAGGGAAATC-TATATTTG 1933 ||| || || || ||| |||| ||| ||| | | | ||||| ||||| ||| | || Sbjct 4140 GCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGCAGATACAGGCAAATCATATTTCTG 4199 Query 1934 CTATGAGTCTTATGCAGTTTTTACAAGGCAAAACAATATCTTTTGCTAACCATAAAAGTC 1993 | ||||||||| ||||||| || ||| |||||| | ||| || | || | Sbjct 4200 C-ATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATATCATATGCCAATTCCAGTAGCC 4258 Query 1994 ACTTTTGGCTTCAACCGTTAGCTGACTGCAAGTTTGCTGTATTAGATGATGCTACTTTAC 2053 |||||||||| || || ||||||||| | ||| | | || | || ||||| || | Sbjct 4259 ACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGACTACTGGACGATGCGACGGCCC 4318 Query 2054 CATGTTGGTCATATTTAGATATATACTGCAGGAATGCTTTAGATGGGAATTATGTCTGTA 2113 || ||| | ||| | |||| ||| ||||| ||||||| || || ||| Sbjct 4319 AGTGCTGGACGTATATTGATACATATCTTAGGAACCTACTAGATGGAAACCCCTTCAGTA 4378 Query 2114 TAGACAGTAAGCATAAAAATCCTG-TGCAAATCAAAATTCCCCCACTGTTAATCACAACC 2172 ||||||| || ||| || | |||| |||| || ||| ||| ||| | | || |||||| Sbjct 4379 TAGACAGGAAACAT-AAGACCCTGCTGCAGATAAAATGTCCTCCATTAATGATAACAACC 4437 Query 2173 AA 2174 || Sbjct 4438 AA 4439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24009254970336