Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq532 271 5e-68 seq1592 145 5e-30 seq32514 140 2e-28 seq15426 131 1e-25 seq9160 131 1e-25 seq9058 131 1e-25 seq18123 125 5e-24 seq8531 120 2e-22 seq2779 109 4e-19 seq4426 105 4e-18 seq12857 102 5e-17 seq20862 98.7 7e-16 >seq532 Length=46805 Score = 271 bits (300), Expect = 5e-68 Identities = 329/445 (74%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 ||||| | | | || || ||||| ||||| || || ||||||||||| || |||||| Sbjct 22333 ATGGGAAGCTTAAATGTCAATCGCAATGTCAGCGATGCCTTCTACCGCTATAAGATGCCG 22392 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 || ||| |||||||| ||||| || ||||||||||| || || || || ||||| ||| Sbjct 22393 CGGATCCAGGCCAAGGTGGAGGGCAAAGGAAACGGTATCAAGACAGTGATCGTCAATATG 22452 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341 || || ||||||||| |||| || || ||||| || ||||| ||||| ||||| ||| Sbjct 22453 GTGGACGTGGCTAAGGCGATCGGTCGTCCGGCCACGTATCCGACCAAATACTTCGGTTGC 22512 Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCG 6401 || || ||||| ||||| || |||||| ||| ||||||||||||||||| ||||| ||| Sbjct 22513 GAGCTGGGCGCGCAGACCCAATTTGATTTCAAGAACGAGCGCTTCATCGTCAACGGCTCG 22572 Query 6402 CATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGT 6461 ||| | | | |||||||| || || || ||||| |||||||| || | ||| || ||| Sbjct 22573 CATGATGCCACGAAGCTGCAAGATTTGCTGGACGGTTTTATTCGGAAATATGTTCTATGT 22632 Query 6462 CGGGAATGCGATAACCCGGAGACCGAGCTTATTGT---GTCTACCAAGAGAAACACCATC 6518 | || ||||| || ||||| || ||||| || || |||| ||| | ||| ||| Sbjct 22633 CCGGCTTGCGACAATCCGGAAACTGAGCTGATGGTCAGCTCTAAGAAGGG---CACGATC 22689 Query 6519 TCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA--CACAAACTCA 6576 || || || ||||| || || || | ||||| || || | || ||||| | | Sbjct 22690 TCGCAAGGTTGCAAGGCCTGTGGGCATCATGGTCTTCTAGA--GAGCAACCACAAGTTGA 22747 Query 6577 ACACCTTCATACTGAAGAATCCTCC 6601 |||||| ||| ||||||| || || Sbjct 22748 ACACCTACATCTTGAAGAACCCGCC 22772 >seq1592 Length=29089 Score = 145 bits (160), Expect = 5e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 ||||| || ||||| |||||| |||||||||||||||||||| ||||| ||| || Sbjct 199 CGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGTCCG 258 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || || || || || || | | || ||||| | |||| |||||||||| Sbjct 259 TCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTG 318 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 || |||||| || ||||||| || |||||| | || ||||| || |||||| Sbjct 319 TCTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGTAATA 378 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| |||||||||||||| ||||| || ||||| Sbjct 379 GTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| || | ||| ||| || ||||| ||||| || | Sbjct 413 TACCACCACGTAGACGAAGAACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCGG 472 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || |||| || | |||||||| ||||| || | | ||| ||||| | || Sbjct 473 AAAGCGTGCGGCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGG 532 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||| ||| |||||| || ||||||| || || ||| | ||||| Sbjct 533 GGATGCCTTCTTTATCCTGAATTTTCGCTTTGACATTCTCGATCGTGTCTGAAGCTTCAA 592 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || ||||| || || || |||||||||||||| || || |||||||| Sbjct 593 CCTCCAATGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATCTGCAT 641 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| ||| |||||| ||||| |||||||||||||| ||||| |||| |||| || Sbjct 661 ACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGACAAGGTACGTCCGTCTTCA 720 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||| ||||| || || | ||| || || || | || | || ||||||||| | Sbjct 721 AGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCCTCTTTGTCCTGA 780 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || |||| || ||| || ||||||||| | || |||||||| Sbjct 781 ATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAACTTCGAGAGTTATAGTTTTT 840 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || ||||| || ||||||||| Sbjct 841 CCAGTTAATGTCTTCACAAAAATCTGCATG 870 Score = 82.4 bits (90), Expect = 5e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 38133 TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGG 38192 |||||||||||||| ||||| ||| |||| || | || || || || || || | Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 38193 CGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACA 38252 | || ||||| | || | |||||||||||| |||||| || ||||||| | Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATC 120 Query 38253 GTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATC 38312 ||||| || ||||| ||||| || |||||||| || | || || ||||| ||| Sbjct 121 GTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATC 180 Query 38313 TGCAT 38317 ||||| Sbjct 181 TGCAT 185 >seq32514 Length=679 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 496 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 555 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 556 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 590 >seq15426 Length=3242 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| Sbjct 3211 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGACAGTAGATAGGGACGGTGGGAATCTCGT 3152 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3151 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3117 >seq9160 Length=6747 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| Sbjct 6716 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCGT 6657 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6656 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6622 >seq9058 Length=6852 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| Sbjct 6821 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCGT 6762 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6761 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6727 >seq18123 Length=2424 Score = 125 bits (138), Expect = 5e-24 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1695 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 1754 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||||||| Sbjct 1755 GGTCGTATTTAGCCTTA 1771 >seq8531 Length=7397 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| ||||||||| |||| ||||||||||| || ||||| || Sbjct 922 AAGCCCGTTCCCTTGGCAGTGGTTTCGTTAGACAGTAGATAGGGACAGTGGGAATCTTGT 981 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACG 25990 |||||| ||||||||||||||||||||||||||| Sbjct 982 TAATCCATTCATGCGCGTCACTAATTAGATGACG 1015 >seq2779 Length=20704 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 ||||| || || ||||| || |||||||||||||| ||||| || | | | | Sbjct 8161 CGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAAAGAGTTCTGCCA 8220 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || || |||||||| || || ||||| ||||||| || | ||||||||| Sbjct 8221 TCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCTTTG 8280 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 ||| |||||| || || |||| || || ||| | ||| ||||| | ||||| Sbjct 8281 TCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACTTCAAGAGTAATG 8340 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || | |||||||| || |||||||| Sbjct 8341 GTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCAT 8375 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||||| |||| |||||| ||| ||||| || ||||||||||| || | | | | Sbjct 8616 ACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCC 8675 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | |||||||||||||| || ||||| || ||||| | || | |||||| || Sbjct 8676 ATCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGTGGAATGCCTTCCTT 8735 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| || || ||||||| | ||| || | ||| || || | || || Sbjct 8736 GTCTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCTACCTCAAGGGTGAT 8795 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||| || || | ||||||||||| || |||||| Sbjct 8796 GGTTTTCCCAGTGAGAGTTTTCACGAAGATTTGCATG 8832 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||||| |||| |||||| ||| ||||| || ||||||||||| || | | | | Sbjct 8388 ACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCC 8447 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | |||||| || || || || || || || ||||| | ||| | || ||||| Sbjct 8448 ATCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTT 8507 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 |||| ||||| ||||||||| | | |||||| | ||||||||| | || || Sbjct 8508 GTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCAACTTCAAGGGTGAT 8567 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || | || || || || |||||||| Sbjct 8568 GGTTTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 8603 >seq4426 Length=14382 Score = 105 bits (116), Expect = 4e-18 Identities = 81/95 (85%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 || |||||||||||||| || ||| ||||||| ||||||||||| | ||||| || Sbjct 8325 AATCCCGTTCCCTTGGCAGTAGTT-CGCTAGACAGTAGATAGGGACAGTAGGAATCTTGT 8267 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 8266 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8232 >seq12857 Length=4317 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 || ||||| ||||| ||||| ||||||||||||||||| | || | || || Sbjct 3836 ACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCTTCA 3895 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||||||| ||||| || | | |||||||| | |||| ||||||||||||| | Sbjct 3896 AGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCTTTGTCCTGA 3955 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 ||||| || ||||| | | ||||| || ||||| ||||| || || ||| Sbjct 3956 ATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTGATGGTCTTA 4015 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || || ||||| |||||||| Sbjct 4016 CCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || ||||| | ||| ||||| |||||||||||||||| Sbjct 4044 TACCACCACGTAGACGAAGAACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCAG 4103 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | ||||||||| ||||| || | | || ||||| | | Sbjct 4104 AAAGCGTGCGACCATCTTCGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAG 4163 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || ||| |||||| || ||||||| | ||||| || | Sbjct 4164 GGATACCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCGA 4223 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| ||||| || |||||||| || | || || ||||| |||||||| Sbjct 4224 CTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4272 >seq20862 Length=1818 Score = 98.7 bits (108), Expect = 7e-16 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 149 CTCTCTATTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTTACTATCGGTCTCAT 208 Query 20007 GGTAATATTTAG 20018 ||| |||||||| Sbjct 209 GGTTATATTTAG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334796959852124