Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq13889 87.8 2e-12 >seq13889 Length=3816 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 15963 TTGTCCG-AGAGGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGG 16021 ||||| | || |||||| ||||| || |||||||| ||||||||||||||| |||||| Sbjct 1978 TTGTCAGCAGCGGGCGATTAGCTTAGAGGTAGAGCATCTCGTTTACACCGAGAGGGTCGG 2037 Query 16022 GGGTTCGATCCCCTCTTCGCCCA 16044 ||||||||||| || ||||||| Sbjct 2038 CGGTTCGATCCCGTCATCGCCCA 2060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566971044918400