Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq12857 149 5e-31 seq2779 140 3e-28 seq1592 122 7e-23 seq121 105 6e-18 >seq12857 Length=4317 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || |||| ||||||||| | |||||||| || ||||| |||||||| Sbjct 3815 ATACCACCACGAAGCCTCAGAACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCA 3874 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||||||||||||| ||||| | || | | |||||| |||||| Sbjct 3875 GAAAGCGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGA 3934 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||||||||| ||| || ||| | | ||||| || |||| | ||| Sbjct 3935 GGGATGCCTTCTTTGTCCTGAATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCG 3994 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| ||||| || || ||||||||||| Sbjct 3995 ACTTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| |||||||| | | ||||||||||| || ||||| || ||||| |||||||| Sbjct 4043 ATACCACCACGTAGACGAAGAACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCA 4102 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| |||||| |||||||| || || |||| | | ||| || |||||| Sbjct 4103 GAAAGCGTGCGACCATCTTCGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGA 4162 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || ||| || ||| | | || | || || | | ||| Sbjct 4163 GGGATACCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCG 4222 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| ||||| ||||| || || ||||||||||| Sbjct 4223 ACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4272 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 ||||| ||||||||||| ||||| || ||||| || |||||| || || || || Sbjct 3613 ATGTAGTGTAGATTCTTTCTGAATATTATAATCTGACAAAGTACGTCCGTCCTCGAGCTG 3672 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 || || ||| | || || | || || || ||||||||||| |||||||| ||| || Sbjct 3673 CTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGAATGCCCTCTTTGTCTTGAATTTT 3732 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 |||| | || | || || | | || || |||| || | ||||| || || Sbjct 3733 AGCCTTTACATTCTCGATCGTATCCGAAGCCTCTACCTCCAAAGTGATAGTTTTTCCTGT 3792 Query 114359 CAGAGTTTTTACAAAAATCTGCAT 114382 || |||||| || ||||| ||||| Sbjct 3793 CAAAGTTTTGACGAAAATTTGCAT 3816 >seq2779 Length=20704 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || |||| ||||||||| || | |||||||| |||||||| || |||||| Sbjct 8149 CCTCCGCGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAA 8208 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| | |||||| || || ||||| || | |||||||| || || || |||||| Sbjct 8209 AGAGTTCTGCCATCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGA 8268 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| || ||| ||||| | || | |||||| | | |||||| Sbjct 8269 ATTCCTTCTTTGTCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACT 8328 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | |||||||| || |||||||| ||||| |||||||| Sbjct 8329 TCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCAT 8375 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | ||| | ||| ||||| || || || ||||||||| Sbjct 8374 ATTCCTCCACGAAGACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCG 8433 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | ||||||||||||||| |||||| | || |||||||| || ||||| Sbjct 8434 GAAAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGG 8493 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || |||||||| || || || | | ||| | ||| || | | ||| Sbjct 8494 GGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCA 8553 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| || ||||| |||||||| |||||||| Sbjct 8554 ACTTCAAGGGTGATGGTTTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 8603 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | ||| | || ||||| || || || ||||||||| Sbjct 8602 ATTCCTCCACGAAGACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCG 8661 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | |||||| || ||||| || || |||| || ||||| || || || Sbjct 8662 GAAAGAGTTCTGCCATCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGT 8721 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| ||| | | || | ||||| | | ||| Sbjct 8722 GGAATGCCTTCCTTGTCTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCT 8781 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | ||||| || || |||||||| || || || |||||| Sbjct 8782 ACCTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATTTGCATG 8832 >seq1592 Length=29089 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||||| ||| | ||| | ||| | || ||||| || ||||| ||||||||| Sbjct 640 ATTCCGCCACGTAATCTGAGAACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCG 699 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| |||||||| ||||| || ||| | || | ||||| ||||| || Sbjct 700 GACAAGGTACGTCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGT 759 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || |||||||| |||||| |||| | || | ||||| | || ||| Sbjct 760 GGAATACCCTCTTTGTCCTGAATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCA 819 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || || | || | ||||| || || | || || |||||||||||||||| Sbjct 820 ACTTCGAGAGTTATAGTTTTTCCAGTTAATGTCTTCACAAAAATCTGCATGG 871 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || |||| |||||||||||| | || ||||| |||||||| ||||||||| Sbjct 184 ATACCTCCGCGAAGTCGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCG 243 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || || || || || || || ||| | || | | ||| || |||||| Sbjct 244 GACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGA 303 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||||||||| ||| || ||| | | || | || || | | || Sbjct 304 GGGATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCT 363 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || |||| ||||| || ||||| ||||| Sbjct 364 ACTTCCAAAGTAATAGTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| |||||||| | | ||| || || | || || ||||| ||||||||||| ||| Sbjct 412 ATACCACCACGTAGACGAAGAACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCG 471 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||||| ||||| ||||| |||| | | || || || || Sbjct 472 GAAAGCGTGCGGCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGG 531 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||||||||| || ||| || ||| | | || | ||||| | | ||| Sbjct 532 GGGATGCCTTCTTTATCCTGAATTTTCGCTTTGACATTCTCGATCGTGTCTGAAGCTTCA 591 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| ||||| ||||| |||||||| Sbjct 592 ACCTCCAATGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATCTGCAT 641 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 114198 TGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGA 114257 ||||| ||||||||| || || || || || || || || || ||| | || | Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 114258 CGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACG 114317 | ||| || ||||||||||||||||||||||| ||| || ||| | | |||| Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATC 120 Query 114318 GTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATC 114377 || || | | ||||| |||| || | ||||| ||||| ||||| || || |||||| Sbjct 121 GTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATC 180 Query 114378 TGCAT 114382 ||||| Sbjct 181 TGCAT 185 >seq121 Length=74473 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 |||||| ||| ||||||| ||||| ||||| | |||||| |||||| || || Sbjct 8107 ATGTATACTAGTACCTTTTTGGATGTTATAATCAGAGAGAGTACGTCCATCTTCCAGCTG 8166 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 ||| ||||| |||| || ||||| || || || ||||| || ||||| || |||||| Sbjct 8167 TTTTCCAGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATCTT 8226 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 ||| | | ||| | ||| || | || ||| || || | || | ||||| || || Sbjct 8227 GGCTTTCACATTTTCGATGGTATCAGAGGCTTCTACCTCGAGAGTAATGGTTTTACCAGT 8286 Query 114359 CAGAGTTTTTACAAAAATCTGCATGG 114384 || ||||| || ||||||||||||| Sbjct 8287 GAGGGTTTTGACGAAAATCTGCATGG 8312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419945949240048