Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq942 100 3e-16 >seq942 Length=37279 Score = 100 bits (110), Expect = 3e-16 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 ||||||||||||||| | ||||||||| || | |||||| || |||||||| || || Sbjct 15872 ACCAGTAACATGAGCGATCATATAAGTCAATAAGGAATATGACGCTATGTTAAATGGCAC 15813 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 ||| |||||||| ||| | || ||||| ||||| || | ||||||| | ||| Sbjct 15812 TCCTAAACCCATATCTGCGCTTCTTTGATAAAGCTGCGCAGACAATTCACCGTTATTTAC 15753 Query 20359 ATAAAATTG--ACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 ||||||||| |||||| |||||| || || | ||||| Sbjct 15752 ATAAAATTGTACCATAAC--GTGACACGGTGGTAATGCCAT 15714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441169746443360