Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq10785 188 3e-43 seq4369 100 1e-16 >seq10785 Length=5498 Score = 188 bits (208), Expect = 3e-43 Identities = 560/857 (65%), Gaps = 25/857 (3%) Strand=Plus/Minus Query 65904 GTGGACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTAT 65963 ||||| || || |||||||||| | | || || |||||| ||| ||| || Sbjct 4434 GTGGAAACGATCTCCACCGGCTCACTGTCACTCGATATCGCTCTGGGCGCCGGCGGCCTG 4375 Query 65964 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 66023 || | |||||| | || || || ||||| || || || || || || | || || Sbjct 4374 CCAATGGGCCGCATCGTCGAAATTTACGGCCCGGAATCCTCCGGTAAAACCACTCTGACG 4315 Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCC 66080 || || | | | ||| ||| | || || ||||| || || | |||||| ||| Sbjct 4314 CTGCAGGTGATCGCC---GCCGCGCAGCGCGAAGGCAAAACCTGTGCGTTCATCGATGCC 4258 Query 66081 GAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTG 66140 || || | || || ||| || || ||| || || ||| ||||||| || Sbjct 4257 GAGCACGCGCTGGATCCTATCTATGCGAAAAAGCTGGGCGTCGATATCGACAACCT---- 4202 Query 66141 GTTGTGC----AGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAA 66196 | ||||| |||| ||||| ||||||||||| ||||| ||| ||| || | Sbjct 4201 GCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGACCCG 4142 Query 66197 GTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGA 66256 || |||| |||| | ||||| | || ||||| |||||||| ||| |||| |||||| Sbjct 4141 CTCCGGCGCGGTTGACGTCATCATCGTCGACTCCGTGGCGGCGCTGACGCCGAAGGCGGA 4082 Query 66257 GCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGC 66316 ||||||| || ||||| || |||||| | || || || || ||||| ||||| Sbjct 4081 AATCGAAGGTGAAATCGGCGATTCGCACATGGGGTTGGCGGCGCGTATGATGAGCCAGGC 4022 Query 66317 CATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCA 66376 ||||| |||||| |||||| | | | |||| || || | | | || || Sbjct 4021 GATGCGTAAGCTGGCCGGCAACCTGAAAAACGCCAATACCCTGCTGATCTTCATCAACCA 3962 Query 66377 GCTGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACCGGTGG 66433 | | || ||| || || ||| | ||| |||| || ||||| ||||| || Sbjct 3961 GATCCGTATGAAAATTGG---TGTGATGTTCGGCAACCCG---GAAACCACGACCGGCGG 3908 Query 66434 TAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAA 66493 ||| || ||| |||||||| ||||||||| ||||| |||| | |||| | || || Sbjct 3907 TAACGCCCTGAAGTTCTACGCTTCGGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAA 3848 Query 66494 GGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGC 66553 |||||||| || | || |||| | || |||||||| || || |||||||| | || Sbjct 3847 AGAAGGCGACGAAGTGGTGGGCAGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGC 3788 Query 66554 GCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCG-CGAGG 66612 | ||| | ||||||||||| ||| | |||||||| ||||| | | || || Sbjct 3787 TGCGCCGTTCAAACAGGCTGAGTTCCAAATCATGTACGGCGAAGGCATCAACAGCCGTGG 3728 Query 66613 CTGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCA 66672 | ||||| |||| ||| ||| | | | ||| | || | || ||||||| || Sbjct 3727 C-GAACTGGTCGATCTGGGCGTGAAGCACAAGATGATCGAAAAAGCCGGCGCCTGGTACA 3669 Query 66673 AGTACGGGGACAAGAACATCGGCCAGGGCAAGCCCAAGACCGTGCAGTGGCTGAAGGACA 66732 || | | |||| ||||| ||||||||| | || || | | ||||| || | Sbjct 3668 GCTATAACGGCGAGAAGATCGGTCAGGGCAAGGCGAATGCCTGTAACTTCCTGAAAGAAA 3609 Query 66733 ACCCGGACGTCGCCGCC 66749 |||||| |||||||| Sbjct 3608 ACCCGGCTATCGCCGCC 3592 >seq4369 Length=14554 Score = 100 bits (110), Expect = 1e-16 Identities = 261/398 (66%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 65943 GCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCT 66002 || || ||||| || ||| ||| | ||||| | | || || ||||| ||||| Sbjct 2812 GCGCTGGGCATTGGCGGGGTTCCTCGTGGCCGTATTATCGAAATTTACGGCCCTGAAAGC 2871 Query 66003 TCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAAC 66062 ||||| || |||||||| || || | || | || || ||| || || | | Sbjct 2872 TCAGGAAAAACAACGTTGGCGCTGCATATCCTTGCGGAAGCGCAAAAGCTTGGCGGAACC 2931 Query 66063 GCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTG 66122 || || | || || |||||||| |||| || || | |||||| | || || Sbjct 2932 GCTGCATTTATTGATGCCGAACACGCTCTAGATCCCGGCTACGCCCGTAAATTAGGCGTT 2991 Query 66123 GATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTT 66182 ||||| || |||| | | ||||| || || || || ||||| |||| ||| Sbjct 2992 GATGTGGATGATCTTCTTTTAAGTCAGCCTGATACAGGGGAACAGGCTTTGGAAATCACC 3051 Query 66183 GACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTG 66242 || || || |||| || ||| | ||||||||||| || ||||| || || Sbjct 3052 GATACGCTTGTGCGTTCTGCCGCTGTTGATTTAATCGTTGTGGATTCCGTGGCCGCATTG 3111 Query 66243 GTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGC 66302 ||||| ||||||||| |||||||| || || || || || ||||| |||| || || Sbjct 3112 GTGCCAAAGGCGGAGCTTGAAGGGGATATGGGAGATTCCCATGTCGGTTTGCAGGCACGT 3171 Query 66303 CTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGAT 66340 ||||| |||||| | || |||||||| || || || Sbjct 3172 TTGATGAGTCAGGCGCTTCGTAAGCTGACAGGGACAAT 3209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242361640205168