Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq32985 141 7e-29 >seq32985 Length=658 Score = 141 bits (156), Expect = 7e-29 Identities = 380/575 (66%), Gaps = 17/575 (3%) Strand=Plus/Minus Query 86182 ACTTTTTAAACGACATCCAGTTCATGACCAATAAGTGGATGTTGTCGAGATCGTTCAGCA 86241 ||||| | ||||| ||||||||||||||||| | |||| | | | |||||||||| Sbjct 578 ACTTTGTCAACGATATCCAGTTCATGACCAACAGGTGGCTCCTTCACAACTCGTTCAGCA 519 Query 86242 TTAACTTGTCCGACTTC----AGATCCGTGGACGGCGTCAGAGGGGTCGTGGACGACAAG 86297 | || | || ||| | | | ||| || || | || ||||| ||| ||| Sbjct 518 TCGACATTTCGGACGCCTACGACAACCG-GGCCGTTGAAAGTATGGTCGCGGAG---AAG 463 Query 86298 CTGGCCGAGGCGAAGGTGGTCGAAGAAACCATCATCAACAAAAAATTAAAAGAGGCCAAG 86357 |||| ||| || ||| |||||| || || | ||||| | |||| ||| ||||| Sbjct 462 CTGGACGAAGCCCAGGCGGTCGACGAGACGGTGCTCAACCCACGATTACGAGAAGCCAAA 403 Query 86358 ATAAACGGCGTTTTGCCCAACGCCAAGGATCTGGGCATGAAAATATCGACGCAGATCGA- 86416 || ||| | | || | ||||| || || |||| ||| || |||| ||| | Sbjct 402 ATCAACCTCATCCTGTCAAACGCGAAAGACGTGGGAATGCGCAT-----CGCAAATCAAG 348 Query 86417 -AAACAACAACATGGTGACGACCATATTGTCCGGCAGCAAGGGCGATTACTTCAACCTCG 86475 | |||| ||| | || || || || || || || || || || || |||||||| | Sbjct 347 GACACAATAACTTTGTCGATACTATTTTATCGGGAAGTAAAGGAGACTATTTCAACCTGG 288 Query 86476 GACAGGTGAAGGGCTTGCTGGGCCAGCAGATCATCAACAGCAAGCGCATCCCGACGAAGA 86535 | || || || || | | ||||| |||||||||||| ||| || ||||| | | | Sbjct 287 GTCAAGTCAAAGGTCTTTTAGGCCAACAGATCATCAACGGCAGCCGAATCCCTAAAATGG 228 Query 86536 TAGACAACGGCACGAGATCGCTGCCGCACTACCC-CAGGAACGAACTTAGCGACCGCGAC 86594 |||||||||| || | | ||| || | ||| | | || | || | ||| Sbjct 227 TAGACAACGGTACTCGTACTCTGATACATTTCCCTCGAGGTCG-GTTGAGTTTTAGAGAC 169 Query 86595 AGGTACGAGTCCAGGGGCTTCATCATGAACGGCTTCTACGACGGCCTGAACGTGAAGGAG 86654 || ||| || | || ||| ||||| | || ||| | || | || ||| Sbjct 168 GAGTGCGAATCGCGCGGTTTCGTCATGTCTAGTTTTTACAAAGGAGTATCTCCGAGGGAA 109 Query 86655 TTCTTCTTCCACGCCATGTCCGGGCGCCAGGGCGTGTGCGACACGGCGATGACGACGTTC 86714 |||||||| ||| |||| ||| || |||||||| || |||||||| ||||| |||||| Sbjct 108 TTCTTCTTTCACAGCATGAGCGGTCGGCAGGGCGTTTGTGACACGGCAATGACCACGTTC 49 Query 86715 ATGTCGGGCTACAACATGCGGAAGCTGGTGAAGCT 86749 |||||||| || | |||| |||| || || || || Sbjct 48 ATGTCGGGTTATACCATGAGGAAACTAGTCAACCT 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381601556287776