Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq19229 650 0.0 seq31064 260 5e-65 seq35391 89.7 2e-13 >seq19229 Length=2166 Score = 650 bits (720), Expect = 0.0 Identities = 808/1090 (74%), Gaps = 30/1090 (3%) Strand=Plus/Plus Query 34139 CTGAACCGCCCCGGGTTTCCTGGAGAGTGTTTTATCTGTGTAACTCAGGCTGCCAGATCA 34198 |||||||||||||| ||| |||||||||||| || | | | ||||||||||||||||| Sbjct 418 CTGAACCGCCCCGGTTTTTTTGGAGAGTGTTTAGTCCG-GAAGCTCAGGCTGCCAGATCA 476 Query 34199 TCGTTTCCGATGGAAGCATAATAAGCTTTTTCTGCTTCTGCCGGAGGAGTATGGCCCAGC 34258 | ||| ||| |||||||||||||||||| |||||| |||| || | || || ||| Sbjct 477 TTATTTGTACTGGTAGCATAATAAGCTTTTTCGGCTTCTACCGGCGGTATGTGTCCTAGC 536 Query 34259 CTTCCCAGCAATCGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACT 34318 | | |||| || | ||||||||| ||||||||||||||| ||||| || || |||||| Sbjct 537 CGTTCCAGTAACCTTCGATTGTTGAACCAGTCCACCCACGCCAGTGTCGCAAGCTCCACT 596 Query 34319 TCTGCACGGTTTTTCCAGCTCTTACGGTGTATTACCTCCGCTTTGTAAAGACCATTGATG 34378 || || ||||||||||||| |||||||| || || |||||||||||||| |||||||| Sbjct 597 TCCGCGTGGTTTTTCCAGCTTTTACGGTGGATCACTTCCGCTTTGTAAAGGCCATTGATA 656 Query 34379 CTCTCAGCCATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGCCAGTA-ATCC 34437 ||||| |||| || || || || ||||||||||| || ||||| || |||| | ||| Sbjct 657 CTCTCGGCCAGGGCATTATCGTAAGAGTCGCCTGTGCTGCCTGTCGACGCCAACAGCTCC 716 Query 34438 GGCTTCTTTTAGTCGCTCCGTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCTGTG 34497 | | || | | |||| || || ||||||||||| || || ||||| || || ||| Sbjct 717 GAC-TCCTGCAACCGCTGGGTGTACGCCAGTGACACGTATTGGGAGCCCTTGTCCGAGTG 775 Query 34498 ATGGATGGTGCCAGACGGACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAA 34557 |||||| || || | |||||||| | ||||| || || || ||||||||||||||||| Sbjct 776 ATGGATTGTACCTGTGGGACGACGAGACCACAGAGCTTGTTCTAGCGCATCCAGCACGAA 835 Query 34558 TGTCGTTTCCATAGACGATGAGACCCGCCACCCCACGAT-GTATCCGGCAAACACATCAA 34616 | | || ||| ||||||||||||| ||| || ||||| || | ||| |||||||| | Sbjct 836 CCTTGCTTACATCGACGATGAGACCCTCCAGCCAACGATCGTGT-TGGCGAACACATCGA 894 Query 34617 TGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCC 34676 |||| ||||||||||| ||||| |||||| ||||||||||| |||||||| || || Sbjct 895 TGATGAACGCCACATACGCGAAGGCCTGCCGGGTGCTGACGTACGTAAAATCTGCACACC 954 Query 34677 ACAGCTGGTCAGGTCGTTCTGCCACGAACTGCGGCTTTACGCGGTCGCCTGCGGCAACGG 34736 | ||||| | || ||||||||||||||||| | ||||| | || | |||| | | Sbjct 955 AAAGCTGATTGGGACGTTCTGCCACGAACTGACGGTTTACCAGATCCGCAGCGGTCGCTG 1014 Query 34737 CTTTCCGGCTGA---TGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAAGTCCCA 34793 ||| || | || ||||| | ||| ||| || ||||| || || ||| || | Sbjct 1015 TTTTGCGACCGACTGTGGTCTTGATGAC---TTTGCCGCGGAGTACGCCCCTAAGACCGA 1071 Query 34794 TAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCGTAACAACT 34853 | | || ||||| | || ||||| | ||| || || | || || || | |||| Sbjct 1072 TTATTTTCAGCAGACGCTCAACCGTACACCGGGCAACGCTAAAACCCTCGCGAAGTAACT 1131 Query 34854 GACGCCAGACTTTACGCACACCGTACAC-CTGATGATTTTCATCGTATACGCGCTGTATC 34912 ||||||||||||| ||| | || || || ||| | |||||| ||||| ||||| | |||| Sbjct 1132 GACGCCAGACTTTTCGCGCTCCATAGACACTG-TAATTTTCTTCGTAAACGCGTTTTATC 1190 Query 34913 T-CTCTCTTCAGCCAGTCGTCGTGCTGCGCACGGGCACTGCGTTTATCCGGAT---GATG 34968 | || || || | || | || | || |||| ||| || |||| | || Sbjct 1191 TCCTGGCTGATTTGAG-CATCATACTTTTCTCGTTGGCTGCATTTTTCAGGATGTAGCTG 1249 Query 34969 TCGCTGTTGCTGACAATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTGCATACCGG 35028 || ||||| || || ||| || || |||||||||||| ||| |||| |||||||| Sbjct 1250 GCGTTGTTGATGCCA---GTAGTATGTCTACGGGGCAATATCCAGCTCGCGACATACCGG 1306 Query 35029 TCCGACCCC----GTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCCAGAG 35084 |||||||| |||| ||| ||| | || |||||||| ||||||||||| | Sbjct 1307 CCCGACCCCATGTGTAC----CACTCAGACGTTGCATAAGTGGCATTATTTTTTCCAGTG 1362 Query 35085 GCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGTTACTGCG 35144 ||| |||| |||||||| |||||||||||| || |||||||| | || || || ||||| Sbjct 1363 GCGATCGAGCTCCGCCTGCGCAAAATAAGCAGAGGCCTGGCGCAATATGTCATTGCTGCG 1422 Query 35145 GCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCAGACGCTGACGTTCAGCGCTGGTGAG 35204 ||| || || ||||| ||||||||||| |||| | ||||||||||||| | || | || Sbjct 1423 GCGTAGCTC-CGATTCTCACGTTCCAGTTCTTGTAAACGCTGACGTTCATTGGTGCTCAG 1481 Query 35205 CCCACCATCA 35214 | | ||| || Sbjct 1482 CTCGCCAACA 1491 Score = 205 bits (226), Expect = 4e-48 Identities = 297/420 (71%), Gaps = 22/420 (5%) Strand=Plus/Plus Query 15040 GTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATT 15099 |||| |||||||| ||| ||||| | || |||||||| | || || || || || || Sbjct 1 GTTGTTGCCTCCTATGAGCCCGGTGTCTCTGTCTCAAAATTGGCGCTGGAGAACGGTATC 60 Query 15100 AACGCCAATCTGTTGTTCAAATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCT 15159 ||||||||| | ||||| |||||||| ||||| | ||| ||| || | | |||||| Sbjct 61 AACGCCAATTTATTGTTTAAATGGCGTCAACATTCGCGGCTGGGGAAAATCCCGTTACCT 120 Query 15160 TCTTCA---------GAGAGCCCCCAGCTACTTCCTGTGACTCTCGATGCAG-------- 15202 ||| || | || | || ||||| | || || ||||| | Sbjct 121 ATATCACCTGAAGCGGATATGCCACTACTGCTTCCGATTACACTTGATGCCGAAACCAAA 180 Query 15203 -CTGCCGAACAGCCAGAATCGCTCGCAGAGGACCCGGAAACCCT--CAGTATCAGCTGTG 15259 |||| | || ||| || | | | | ||| | | | | || | |||| ||||| Sbjct 181 CCTGCTAATCAACCACCATTCCCCCCTGCGGAGCGGACAGCGCTTCCGCTATC--CTGTG 238 Query 15260 AGGTAACGTTCCGGCACGGGACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGA 15319 || ||||||||||| ||||||| || ||| | ||||| ||||||||||| | ||| Sbjct 239 AGATAACGTTCCGGAACGGGACACTTCGCCTGGATGGCTCCGTCAGCGAAAACATGCTGG 298 Query 15320 CTCTGCTGATACAGGAACTGAAGCGATGATCCCGTTACCTTCCGGGACCAAAATTTGGCT 15379 | ||||||||||||| || |||||||||||||| | || | ||||| ||||| ||| | Sbjct 299 CAATGCTGATACAGGAGCTCAAGCGATGATCCCGCTTCCGGCAGGGACAAAAATCTGGTT 358 Query 15380 GGTTGCCGGTATCACCGATATGAGAAATGGCTTCAACGGCCTGGCTGCGAAAGTACAAAC 15439 ||||||||| |||||||||||| | || |||||||| |||||||| || ||||| ||||| Sbjct 359 GGTTGCCGGCATCACCGATATGCGTAACGGCTTCAATGGCCTGGCAGCCAAAGTGCAAAC 418 >seq31064 Length=750 Score = 260 bits (288), Expect = 5e-65 Identities = 483/709 (68%), Gaps = 20/709 (3%) Strand=Plus/Plus Query 34624 CGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTG 34683 |||||||||| ||||||||||||| ||||| ||||| |||||||| || ||| ||||| Sbjct 1 CGCCACATAGGCGAAGCCCTGCCAGGTGCTAACGTACGTAAAATCTGCACACCAAAGCTG 60 Query 34684 GTCAGGTCGTTCTGCCACGAACTGCGGCTTTACGCGGTCGCCTGCGGCAACGGCTTTCCG 34743 | || ||||||||||| ||||| | ||||| | || |||| || | | ||| || Sbjct 61 ATTGGGACGTTCTGCCACAAACTGGCGGTTTACCAGATCCGCTGCTGCCGCTGTTTTACG 120 Query 34744 GCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCAT 34803 | ||| || || || ||| || ||||| || || ||| || || | ||| Sbjct 121 ACCGATCGTGGTCTTGATGACTTTGCCACGGAGTACGCCCCGAAGACCTATTATTTTCAT 180 Query 34804 GAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCGTAACAACTGACGCCAGAC 34863 || ||| | || ||||| | || || || | || || || | ||||||||||||||| Sbjct 181 CAGGCGTTCAACAGTACACCGGGAGACGCTAAAGCCCTCGCGGAGCAACTGACGCCAGAC 240 Query 34864 TTTACGCACACCGTACACCTGATGATTTTCATCGTATACGCGCTGTATCTC-----TCTC 34918 ||| || | || || || | | |||||| |||| ||||| | |||||| | Sbjct 241 TTTTCGTGCTCCATAGACATTGTAATTTTCTCCGTAAACGCGTTTTATCTCCTGGATGGT 300 Query 34919 TTCAGCCAGTCGTCGTGCTGCGCACGGGCACTGCGTTTATCCGGATGATGTCGCTGTTGC 34978 || ||| ||| || | || || | ||| || ||||| | | ||||| Sbjct 301 TTGAGCA-----TCGCACTTTTCTCGTTGGCTACATTTCTCAGGATGTAGCTGGCGTTGC 355 Query 34979 TGACAATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTGCATACCGGTCCGACCCCG 35038 ||| |||||| || ||||||||||||| || ||||| |||| | || |||| ||| Sbjct 356 TGATGCCAGTAATATGTCGACGGGGCAATATCCAATTCGCGGCATCCTGGCCCGAACCCC 415 Query 35039 TACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCG 35098 || | ||| || | ||| ||||| |||| |||| |||| || |||||| |||| Sbjct 416 TATTCGCCACTCAAGTCATCAAGCAGCAGCATTATTTCATCCAATGGTGGTCGAGTTCCG 475 Query 35099 CCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCACGAT 35158 ||| |||| ||| || |||| |||||| | ||| ||||| || || ||||| Sbjct 476 CCTGGGCAAGATACGCCGAAGTCTGGCGCAAGATGTCGTTGCTACGTCGCAG-------- 527 Query 35159 TTTCACGTTCCAGCTCTTTCAGACGCTGACGTTCAGCGCTGGTGAGCCCACCATCACCGC 35218 || ||| || |||||||| || ||| | |||||| || || || ||| ||||||||| Sbjct 528 -TTTACGCTCAAGCTCTTTAAGGCGCAGTCGTTCA-CGGGGGGGAATCCAGCATCACCGC 585 Query 35219 CCCCGGTATCCCGCTCATGCTGGCGAACCCAGACACGCAGAGTCTCCGGCGTACAGCCAA 35278 |||| || ||| |||||||| || | || | ||| ||| | || | || || | Sbjct 586 TACCGGAATTCCGTTCATGCTGACGCAGCCCCGCCTGCAAAGTGTTAGGGCTGCAACCGA 645 Query 35279 TCTTTGGGGCAATGGAACAAATTGCCGCCCACTGTGAGTCATATTCATC 35327 | ||||||||||| || || ||||| || || | |||| |||| Sbjct 646 TTTTTGGGGCAATAGAGAGGATGGCCGCATGCTCAGATTTATATCCATC 694 >seq35391 Length=557 Score = 89.7 bits (98), Expect = 2e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 24376 GCTCGGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTC 24435 ||| ||||| ||||||||||||| ||||| ||||||||||||||| ||||| |||||| Sbjct 195 GCTTGGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTC 136 Query 24436 AAATCCAGCA-AGGCCACCAA 24455 ||| ||| || ||||||||| Sbjct 135 AAACCCAACAGGGGCCACCAA 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198661937333832