Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq12857 129 6e-25 seq1592 125 7e-24 seq2779 122 8e-23 seq121 91.5 1e-13 >seq12857 Length=4317 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || | || ||||||| || || || || |||||||||||||| Sbjct 4046 CCACCACGTAGACGAAGAACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCAGAA 4105 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| ||| || || |||||||| || ||||||||| ||||||||| ||||| Sbjct 4106 AGCGTGCGACCATCTTCGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGG 4165 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| ||| ||| ||| || |||| | || | || || | |||||| Sbjct 4166 ATACCTTCCTTATCC-TGAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCGAC 4224 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| ||||| ||||| || || ||||||||||| Sbjct 4225 TTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4272 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | | || || ||||| | ||||| || || |||||||||||||| Sbjct 3818 CCACCACGAAGCCTCAGAACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAA 3877 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| ||| || || ||||||||||| | ||||||| ||| ||||| ||||| Sbjct 3878 AGCGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 3937 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| || |||||| ||| ||| || |||| | ||| | || || | |||||| Sbjct 3938 ATGCCTTCTTTGTCC-TGAATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGAC 3996 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || ||||| ||||| || || ||||||||||| Sbjct 3997 TTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 >seq1592 Length=29089 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||||| || ||||| | || || || |||||||||||||||||| | Sbjct 187 CCTCCGCGAAGTCGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGAC 246 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| | ||||||| ||||||||| ||||| Sbjct 247 AAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGG 306 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| || |||| | ||| ||| || |||| | |||| || || | | ||| || Sbjct 307 ATGCCTTCTTTGT-CTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCTAC 365 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || |||| ||||| || ||||| ||||| Sbjct 366 TTCCAAAGTAATAGTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || | ||||| || | || |||||||| ||||| ||||| ||| Sbjct 415 CCACCACGTAGACGAAGAACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCGGAA 474 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || |||||||||||||| ||||||||| |||||||| || || Sbjct 475 AGCGTGCGGCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGGGG 534 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| || || ||| |||||| |||| | |||| ||||| | | || || Sbjct 535 ATGCCTTCTTTATCCTGAATTTTCGCTTTGACATTCTCGATCGTGTCTGAAGCTTCAACC 594 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||||| ||||| |||||||| Sbjct 595 TCCAATGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATCTGCAT 641 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || ||||||| | |||| ||| | || || || || ||||||||||||||| Sbjct 642 TCCGCCACGTAATCTGAGAACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGA 701 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || || || |||||||| || ||| | ||||| |||||||| || || || Sbjct 702 CAAGGTACGTCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGG 761 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| || ||| ||| | | |||| ||||| | || || Sbjct 762 AATACCCTCTTTGTCCTGAATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAAC 821 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 ||||| || | ||||| || || | || || |||||||||||||||| Sbjct 822 TTCGAGAGTTATAGTTTTTCCAGTTAATGTCTTCACAAAAATCTGCATGG 871 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 126929 TGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAAT 126988 ||||||||||||||| || ||||| || || ||||| || || ||| | |||||| Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 126989 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGAC 127047 | ||||||||| ||||| ||||| || |||| | ||| ||| || |||| | || | Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGT-CTTGAATTTTGGCTTTGACATTCTCAAT 119 Query 127048 GGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAAT 127107 || || | ||||||||| | || | ||||| ||||| ||||| || || ||||| Sbjct 120 CGTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAAT 179 Query 127108 CTGCAT 127113 |||||| Sbjct 180 CTGCAT 185 >seq2779 Length=20704 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | |||||| || || || | ||||| || ||||||||||| |||||| Sbjct 8146 GCCCCTCCGCGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCG 8205 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || | ||| || ||||| || || || | || | || |||||||||||| Sbjct 8206 GAAAGAGTTCTGCCATCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGA 8265 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTC 127062 || || || || |||||| |||||| ||| || | | |||| |||||| | | || Sbjct 8266 GGAATTCCTTCTTTGTCCTGGATTTT-TGCTTTTACGTTCTCGATGGTGTCTGAAGCTTC 8324 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| | || | |||||||| || |||||||| ||||| |||||||| Sbjct 8325 GACTTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCAT 8375 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | |||| |||| ||| | ||| || || || || |||||||||||| Sbjct 8376 TCCTCCACGAAGACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGGA 8435 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || || ||||| |||||| | |||| ||||||||||| || || Sbjct 8436 AAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGGG 8495 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| |||||| ||| | | ||| | ||| || | | || || Sbjct 8496 AATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCAAC 8555 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | |||||||| || ||||| |||||||| |||||||| Sbjct 8556 TTCAAGGGTGATGGTTTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 8603 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | |||| |||| ||| | || || || || || |||||||||||| Sbjct 8604 TCCTCCACGAAGACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGGA 8663 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || ||||||||||| || |||||| ||||||||||| || || Sbjct 8664 AAGAGTTCTGCCATCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGTGG 8723 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||| ||||||| | ||| | | || || | | || | ||||| | | || | Sbjct 8724 AATGCCTTCCTTGT-CTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCTA 8782 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || | ||| | ||||| || || |||||||| || || || |||||| Sbjct 8783 CCTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATTTGCATG 8832 >seq121 Length=74473 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 |||||| ||| ||||||| || || ||||| | || || ||| || ||||| Sbjct 8107 ATGTATACTAGTACCTTTTTGGATGTTATAATCAGAGAGAGTACGTCCATCTTCCAGCTG 8166 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 ||||||||| |||| | |||||||||||| || || || ||||| || ||| ||| | | Sbjct 8167 TTTTCCAGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTATCC-TGAATCT 8225 Query 127030 CTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGG 127088 || || | | ||||| ||| || | || || |||| || | ||||| || | Sbjct 8226 TGGCTTTCACATTTTCGATGGTATCAGAGGCTTCTACCTCGAGAGTAATGGTTTTACCAG 8285 Query 127089 TCAGAGTTTTTACAAAAATCTGCATGG 127115 | || ||||| || ||||||||||||| Sbjct 8286 TGAGGGTTTTGACGAAAATCTGCATGG 8312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475282045856960