Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011765.1 Length=8256 Score E Sequences producing significant alignments: (Bits) Value seq8046 91.5 8e-15 >seq8046 Length=7925 Score = 91.5 bits (100), Expect = 8e-15 Identities = 210/314 (67%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 2349 TTCTAAAGGGCATACCAAAAAAGAATTGCATGGTCCTTTATGGGCCACCTAATACAGGAA 2408 || |||| || | || || ||||||||||| || ||||||| || | ||||||| | Sbjct 4127 TTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGCAGATACAGGCA 4186 Query 2409 AATCA-ATGTTTGCAATGAGCTTAGTGCATTGTTTACGTGGTAAAGTTATCTCCTTTTGC 2467 ||||| || | |||| |||| | |||| | || |||| || || || | | | Sbjct 4187 AATCATATTTCTGCA-TGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATATCATATGCC 4245 Query 2468 AATTCTAAAAGTCATTTTTGGCTTCAGCCCCTGGTCGATGCCAAACTTGGCCTCCTAGAT 2527 ||||| | || || |||||||| |||||| | | || || | || || || || Sbjct 4246 AATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGACTACTGGAC 4305 Query 2528 GACGCTACAGATGCATGTTGGAGCTATATAGATACTTACCTCAGGGGAGGATTAGATGGC 2587 || || || | || |||| ||||| ||||| || || ||| | ||||||| Sbjct 4306 GATGCGACGGCCCAGTGCTGGACGTATATTGATACATATCTTAGGAACCTACTAGATGGA 4365 Query 2588 AACCCAGTTAGCATTGACTGCAAGCATAAGTCTTTGGCACAGCTTAAATTCCCACCTCTA 2647 ||||| | || || ||| | || |||||| | || ||| | |||| || || || Sbjct 4366 AACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGCAGATAAAATGTCCTCCATTA 4425 Query 2648 ATTATAACAACCAA 2661 || ||||||||||| Sbjct 4426 ATGATAACAACCAA 4439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26293108960320