Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq36678 102 2e-17 >seq36678 Length=505 Score = 102 bits (112), Expect = 2e-17 Identities = 132/178 (74%), Gaps = 7/178 (4%) Strand=Plus/Minus Query 14319 ATGATGCTTGCGGTTCTGGAGTATGGAATCGAAGACGAGGAAATGGCAGAGCTCACCAGG 14378 ||| | || || |||||||||| || || |||||||| |||||||| ||| | | | | Sbjct 354 ATGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGGAGTTGGCTAAG 295 Query 14379 CGACTTGCTACCTACCTGACA---AAAGAAAAAGCCCCGAAGAACGGCGAATTCTTCGAG 14435 || || ||| || ||| || |||||||| |||||| ||| | | | |||||| Sbjct 294 CGCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCG--GAA-GTTGCAGCTTTCGAG 238 Query 14436 GCCTGATGTAGAAAGACTGGATCAATCCACAGGAGTAATTATGCCAAA-ACAGCTCAG 14492 || |||| ||| ||||||||||| |||||||||||||||| |||| || ||| || Sbjct 237 GCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAATACTGCTGAG 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134030996475544