Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011811.1 Length=84576 Score E Sequences producing significant alignments: (Bits) Value seq13791 82.4 4e-11 >seq13791 Length=3860 Score = 82.4 bits (90), Expect = 4e-11 Identities = 75/93 (81%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 22478 TTAAAGTTTTATA--GCGGGATGGAGCAG--TGGTAGCTTGCCAGTTTCATTATCTGGAG 22533 |||||| ||| | |||||||||||||| ||||||| | ||| |||| | ||| || Sbjct 498 TTAAAGCTTTCTGTCGCGGGATGGAGCAGCCAGGTAGCTCGTCAGGCTCATAACCTGAAG 557 Query 22534 GTCGTAGGTTCGAATCCTACTCCCGCTTCCAAA 22566 |||||| ||||||||| ||||||||| |||||| Sbjct 558 GTCGTAAGTTCGAATCTTACTCCCGCATCCAAA 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 270397059309828