Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq24957 152 1e-32 >seq24957 Length=1239 Score = 152 bits (168), Expect = 1e-32 Identities = 162/212 (76%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 21601 CTTCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCAGGGCGCACCATTATATATCAACTGG 21660 |||||||||||| |||| ||||||||||||| |||||| |||||| |||||| | Sbjct 474 CTTCTAAGCCGTAGGTCATAGGTTCGAATCCTATAGGGCGTGCCATTAAGTATCAATGAG 415 Query 21661 TTACGCCTCTTTAATTCCCTCCTT--ATTTTCCATATGGGACATATTTGTGACATCATCA 21718 |||||||| || || || || || | |||| |||||||| ||||| ||| | | Sbjct 414 TTACGCCT--TTCATCCCGTCTTTCCAATTTCATCATGGGACAGATTTGGGACTAAACCT 357 Query 21719 CTGAAAATCGAGTCAATTTGCTTCGCGTGTTCCGTTAAATGATTCGGCGCAAGGTGAGCA 21778 | |||||||| ||||||||| |||| || || || | ||| ||||| |||||||||| Sbjct 356 CCGAAAATCGCATCAATTTGCCTCGCATGCTCAGTGAGATGGTTCGGTGCAAGGTGAGTG 297 Query 21779 TATCGGCGCACCATATCGATGCTCTCCCATCC 21810 ||||| | ||||| || ||||||||||| || Sbjct 296 TATCGCTGTACCATTTCTATGCTCTCCCAGCC 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137469493032144