Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq7033 107 2e-18 seq24957 82.4 9e-11 >seq7033 Length=9266 Score = 107 bits (118), Expect = 2e-18 Identities = 78/88 (89%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCACCT-CGCTAGTTTTCAAGACTA 31348 |||||||||||||||||||||||||||| |||||| ||||| ||| ||||||||||| Sbjct 1453 GCGGAGAGGGTGGGATTCGAACCCACGGTAGGCTTGCACCTACGCCGGTTTTCAAGACCG 1512 Query 31349 GAGCCTTCAACCACTCGACCACCTCTCC 31376 | ||||| |||| ||||||||||||||| Sbjct 1513 GTGCCTTAAACCGCTCGACCACCTCTCC 1540 >seq24957 Length=1239 Score = 82.4 bits (90), Expect = 9e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 32021 TAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTA 32078 ||||||||||||||| |||| || ||||||||||| ||||||||||||| |||||||| Sbjct 442 TAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCTA 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621838591485760