Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_013600.1 Length=45169 Score E Sequences producing significant alignments: (Bits) Value seq680 167 7e-37 >seq680 Length=42727 Score = 167 bits (184), Expect = 7e-37 Identities = 435/663 (66%), Gaps = 28/663 (4%) Strand=Plus/Plus Query 742 TGCCGCACCAGGTTGAACTACTGCGCGACACGAAGACTAAAATCCTCGGCCTGTGTTCCG 801 ||||||||||| | || |||||| |||| | ||| ||||| ||||||||||| || | Sbjct 33339 TGCCGCACCAGTTCGACCTACTGGAAGACATCACGACGAAAATTCTCGGCCTGTGCTCGG 33398 Query 802 GCTTCGGTGGCGGCAAGTCATGGGTTGCGGCGCGAAAGGTCATCCAGCTTTTAACACTGA 861 ||| || ||||| || | ||||| |||| ||| || | |||||||| | | ||| Sbjct 33399 GCTATGGCGGCGGTAAAACTTGGGTCGCGGTGCGTAAAGCGATCCAGCTGATGATTTTGA 33458 Query 862 ACCCTGGTCATGATGGCATCGTGACAGAACCGACTATTCCACTCCTGGTTAAAA----TC 917 | || || || || || | || |||||||| ||||| ||||| | Sbjct 33459 ATCCGGGGTGCGACGGTATGATTACCGAACCGACGCACCCACT----GTTAACGCAGGTG 33514 Query 918 ATGTACCCGGAATTGGAAAAGGCATTTGACGAGGCTGGCTTCCGGTGGAAGTTCAATAAG 977 | || || ||| | |||| ||| |||| ||| ||| | || | ||||| || ||| Sbjct 33515 CTTTATCCCGAACTTGAAACGGCGCTTGATGAGTACGGCATTCGATACAAGTTTAACAAG 33574 Query 978 CAGGACAAGATTTATAGCGTGCTGGT----------GAAAGGCAAATGGA-------CAC 1020 ||| ||||||| || |||||||| |||| | | | | ||| Sbjct 33575 GTGGAGAAGATTTTTA-CGTGCTGGGTTTGGGATGAGAAAATCCAGCGCAACCGCCGCAC 33633 Query 1021 GCGTA--ATCTGTGAATCAATGGAAAACTACACCCGCCTAATCGGGGTCAACGCCGCGTG 1078 |||| ||||||| ||| ||||||||||| | ||| || |||| || ||||||||||| Sbjct 33634 ACGTATCATCTGTGCATCGATGGAAAACTATAAACGCTTAGTCGGTGTTAACGCCGCGTG 33693 Query 1079 GATTGTTGCCGACGAGTTCGACACTACTAAGCAAGACGTCGCGCTGGCGGCATATCACAA 1138 | ||| |||||||||||||| | | | |||||||| ||| | || Sbjct 33694 GTGTGTGATGGACGAGTTCGACACCTCGGCGGAGGACGTCGCATATATGGCGTTCGTGAA 33753 Query 1139 ATTGCTCGGTCGTCTGCGTGCTGGCTTCGTCCGCCAGTTCGTCATCGTGTCAACGCCTGA 1198 | |||| |||||||||||| || || |||||| | | || ||||| || ||||| Sbjct 33754 ACTGCTGGGTCGTCTGCGTCGCGGTAAAGTGCGCCAGATGATTATTGTGTCCACACCTGA 33813 Query 1199 AGGCTACCGGGCGATGTACCAGATTTTCGAAGTGGAGAAGGATAGCCAGAAACGTTTGAT 1258 ||| | ||| |||||||||| || |||| ||| ||| ||| || | || Sbjct 33814 AGGTTTCCGCGCGATGTACCGCATCTTCGTCACTGAGTTGGACGAGATGAAGCGGCTTAT 33873 Query 1259 CCGGGCGAAGACTACCGATAATCACCACTTACCGGCAGACTTTATCGACACGCTGCGCAG 1318 | |||||||| ||| || | || | |||| ||||| |||| | ||||| | Sbjct 33874 CAAAGCGAAGACGCGCGACAACCCGCATCTGCCGGAAGACTATATCAAGACGCTCGAAAA 33933 Query 1319 TCAGTACCCCGCTAACCTGATTGATGCGTACTTGAACGGCCTGTTTGTCAACCTTACGTC 1378 || ||| | | || | || |||||| | |||||| ||| |||||| | ||| | Sbjct 33934 ACAATACTCGAAAGAGTTGGTAGAGGCGTACCTAAACGGCGAGTTCGTCAACATGACGGC 33993 Query 1379 GGG 1381 ||| Sbjct 33994 GGG 33996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144356081949688