Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2779 152 2e-31 seq1817 143 1e-28 seq2796 140 1e-27 seq121 125 3e-23 seq1592 118 4e-21 seq12857 116 1e-20 seq237 86.0 2e-11 >seq2779 Length=20704 Score = 152 bits (168), Expect = 2e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| ||||||||||| || ||| | || Sbjct 8376 AATGCAGATCTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 8317 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | ||| |||||| || || || |||||||||||||| ||||| Sbjct 8316 AGACACCATCGAGAACGTAAAAGCAAAAATCCAGGACAAAGAAGGAATTCCTCCCGATCA 8257 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | ||||| | || || || || |||||||| |||||| | | |||||||| Sbjct 8256 GCAACGTCTCATTTTTGCCGGTAAGCAGCTGGAAGATGGCAGAACTCTTTCCGATTATAA 8197 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 |||| | ||||| | |||||||||||||| || |||| Sbjct 8196 TATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACT 8158 Score = 125 bits (138), Expect = 3e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || || || || ||||| || || ||||| |||||| | || Sbjct 8604 AATGCAGATCTTTGTAAAGACTCTCACAGGCAAAACCATCACCCTTGAAGTTGAAGCTTC 8545 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| ||| | | || ||||| || || || || |||||||| || ||||| Sbjct 8544 AGATACCATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCCCCGGATCA 8485 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | |||||| | || ||||||||||||||||| |||||| | | ||||| || Sbjct 8484 GCAGCGTCTGATTTTCGCTGGCAAACAACTTGAAGATGGCAGAACTCTTTCCGATTACAA 8425 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 8424 TATCCAGAAGGAATCCACGCTTCA 8401 >seq1817 Length=26970 Score = 143 bits (158), Expect = 1e-28 Identities = 204/283 (72%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || ||||| ||||| || |||||| |||| | |||||||||||||||| Sbjct 5606 GCTGTTATCACAGTTCCTGCTTACTTTAATGATCAACAAAGAAAAGCAACTAAAGATGCT 5665 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || ||| ||||| |||| ||| |||||||||||||||| ||||| ||||| | Sbjct 5666 GGTGTTATAGCTGGCTTAACAGTTGAAAGAATTATTAATGAACCAACAGCTGCTGCAATT 5725 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| ||| || || || | ||||| | || |||||||||||||| || Sbjct 5726 GCTTATGGTTTAGATAA---AACTGATA---AAGAACACAAAATTTTAGTATTTGACTTA 5779 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATT-GAAGATGGGGTATTTGAAGTAAA 451560 ||||| |||||| |||| ||| | || |||| | ||||| |||||||| Sbjct 5780 GGTGGTGGAACTTTTGATGTTTCAAT-TTTAGAATTAGCTGATGGTACTTTTGAAGTTTT 5838 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 |||| |||||||||| ||| |||| || || ||| ||||| Sbjct 5839 ATCAACTAATGGTGATAATCACTTAGGTGGAGATGATTTTGAT 5881 Score = 136 bits (150), Expect = 2e-26 Identities = 435/663 (66%), Gaps = 44/663 (7%) Strand=Plus/Plus Query 451845 AACCTGTTGATCAAGTATTACATGATTCTAAAATTAG-TAAAGATAAAATTGATGAAATT 451903 |||| ||| | ||| ||| | ||| |||| |||| ||||||| ||||||||||| | Sbjct 6135 AACCAGTTCGTAAAGCTTTAAAAGATGCTAAC-TTAGATAAAGATCAAATTGATGAAGTA 6193 Query 451904 GTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATG-TTGTCTTCTTATTT 451962 | | || || ||||| ||| ||||||| | | ||| | ||| || ||| || Sbjct 6194 CTTTTAGTTGGTGGTTCAACAAGAATTCCAGCAGTACAAAAAATGATTAAAGAATTACTT 6253 Query 451963 TGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGC 452022 |||||| ||| | |||| || || |||||||||| ||||| | ||| ||||| Sbjct 6254 ----GGAAAAGAACCAAACAAGACAGTTAACCCTGATGAAGTAGTTGCTTGTGGAGCTGC 6309 Query 452023 AGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGT 452082 |||||| | || ||| |||| ||||| | | ||| |||| || | Sbjct 6310 TATTCAAGGTGGAATCCTATCAGG---AGATGTTAA-------GGATTTATTAC--TATT 6357 Query 452083 AGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAAT 452142 |||||||||||||||||| | ||| ||||||| ||||| | ||||| |||||| Sbjct 6358 AGATGTAACACCTCTATCATTAGGAATTGAAACTTTAGGTGGTGTTATGACAGTTTTAAT 6417 Query 452143 TAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAA 452202 |||||| || | || || || ||| |||| ||| || || ||||| Sbjct 6418 TAAACGTAATACAACAATACCAACTAGAAAATCTCAAGTTTTTTCAACTGCTGAAGATAA 6477 Query 452203 CCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAA 452262 ||||||| ||| ||||| || || |||| ||| | || ||| | |||||||| | Sbjct 6478 TCAACCAGCTGTTGACATTCATGTTTTACAAGGTGAAAGAGCGATGGCTAGAGATAATCA 6537 Query 452263 TAAACTAGG-AG-----AATTTACT-CTTTCAAACATTCCTCCTATGCCAAGGGGAACTC 452315 || |||| || |||| ||| | | ||| || |||| || | | Sbjct 6538 TAGTTTAGGTAGATTCCAATTAACTGGTCTTAAA-------CCAGCACCAAAAGGTATGC 6590 Query 452316 CTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGC---AG 452372 | ||||||||| || | |||| ||||||| ||||||||| || || | || || Sbjct 6591 CACAAATTGAAGTTGGTTTTGATATTGATGCTAATGGTATTGTTTCAGTTACAGCTAAAG 6650 Query 452373 TTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTAT 452432 | |||| || | ||| | ||||||| |||||| | | ||| || |||| Sbjct 6651 ATTTAAAAACAAAT---AAAGAACAAAAAATAACAATTTCAGGTAATAGTAA---TTTAG 6704 Query 452433 CTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAA-AAATTCAAGGATGATGATGAA 452491 |||||| | ||||| ||||||||| | |||||| || | | || ||| || ||||||| Sbjct 6705 ATAAAGATCAAATTGATAAAATGGTAAAAGAAGCACAAGATAATC-AGGTTGCTGATGAA 6763 Query 452492 CAA 452494 || Sbjct 6764 AAA 6766 >seq2796 Length=20616 Score = 140 bits (154), Expect = 1e-27 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || |||| |||||||| |||||||| | | ||| | | ||||||| | |||| Sbjct 17299 GTACTTATGAAAATGAAGGAAACAGCTGCAGCTTATTTGAATACTCCAGTAAAGAATGCT 17358 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||| || || || |||||||||||| ||||||| |||||||| || ||||| || Sbjct 17359 GTTATTACCGTACCAGCATATTTCAATGATTCACAACGACAAGCAACAAAGGATGCTGGT 17418 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || || ||||| || ||||| ||||| | || |||||||| || |||||||| || ||| Sbjct 17419 CAGATAGCTGGATTGAATGTGCTTCGGGTAATAAATGAACCGACTGCAGCTGCACTTGCA 17478 Query 451445 TATGG 451449 ||||| Sbjct 17479 TATGG 17483 >seq121 Length=74473 Score = 125 bits (138), Expect = 3e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||||||||| |||||||| || || ||| | ||| Sbjct 8310 ATGCAGATTTTCGTCAAAACCCTCACTGGTAAAACCATTACTCTCGAGGTAGAAGCCTCT 8251 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | | ||| || ||||| ||||| || |||||||| || ||||| Sbjct 8250 GATACCATCGAAAATGTGAAAGCCAAGATTCAGGATAAAGAGGGAATTCCACCAGATCAG 8191 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | || ||||| || ||||||||| | ||| | | |||||||| Sbjct 8190 CAGCGACTTATCTTTGCTGGAAAACAGCTGGAAGATGGACGTACTCTCTCTGATTATAAC 8131 Query 391230 AT 391231 || Sbjct 8130 AT 8129 >seq1592 Length=29089 Score = 118 bits (130), Expect = 4e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||| || |||||||||||| | || || || | || Sbjct 413 ATGCAAATTTTCGTCAAAACCTTGACGGGAAAAACTATTACTTTGGAAGTAGAGGCTTCA 354 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| ||||||||||| || ||||| || ||||| ||||| Sbjct 353 GATACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGCATCCCTCCGGATCAG 294 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || |||||| | || || || || || || ||| | || ||| | ||||| ||| Sbjct 293 CAGAGATTGATTTTCGCGGGCAAGCAGCTGGAGGACGGACGCACCTTGTCCGATTACAAT 234 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || || || ||||| || |||| Sbjct 233 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTGCGACT 196 Score = 109 bits (120), Expect = 2e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || |||||||| || || | || || || ||||| Sbjct 185 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAAACCATCACATTGGAAGTCGAGGCATCT 126 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | ||| ||||||||||| || ||||| |||||||| ||||| Sbjct 125 GATACGATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGCATTCCTCCGGATCAG 66 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || |||||| | || || || || || || ||| | || ||| | ||||| ||| Sbjct 65 CAGAGATTGATTTTCGCGGGCAAGCAGCTGGAGGACGGACGCACCTTGTCCGATTACAAT 6 Query 391230 ATT 391232 ||| Sbjct 5 ATT 3 >seq12857 Length=4317 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||| || |||||||| ||| | || || || | || Sbjct 3816 ATGCAAATTTTCGTCAAAACTTTGACAGGAAAAACTATCACTTTGGAGGTAGAGGCTTCG 3757 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || ||||||||||| || || || |||||||||||||| Sbjct 3756 GATACGATCGAGAATGTAAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 3697 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | |||||| | || || || || || || ||| | |||||| | ||||||||| Sbjct 3696 CAAAGACTGATTTTCGCGGGCAAGCAGCTCGAGGACGGACGTACTTTGTCAGATTATAAT 3637 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | ||||| || | ||| | | || ||||| Sbjct 3636 ATTCAGAAAGAATCTACACTACATCTTGTACTCCGTCTTAGAGG 3593 Score = 116 bits (128), Expect = 1e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || ||||| || || || | || || || |||| Sbjct 4044 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACCATCACATTGGAAGTCGAGGCATCC 3985 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| |||||||| || || ||||| || ||||| |||||| Sbjct 3984 GATACAATTGAAAATGTCAAAGCCAAAATTCAGGACAAAGAAGGCATCCCTCCGGATCAA 3925 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || ||||| | || ||||||||||||||||| | || | | ||||| ||| Sbjct 3924 CAGAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACGCTTTCTGATTACAAT 3865 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || || || ||||| Sbjct 3864 ATTCAGAAGGAATCTACTCTGCATTTAGT 3836 Score = 116 bits (128), Expect = 1e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || |||||||| || || | || || || ||||| Sbjct 4272 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAAACCATCACATTGGAAGTCGAGGCATCT 4213 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| |||||||| ||||||||||| || ||||| ||||| Sbjct 4212 GATACGATAGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGTATCCCTCCGGATCAG 4153 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || |||| |||||||| |||||||| | || | | ||||| ||| Sbjct 4152 CAGAGATTGATCTTTGCAGGAAAACAACTCGAAGATGGTCGCACGCTTTCTGATTACAAT 4093 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| |||| | || ||||| Sbjct 4092 ATTCAGAAGGAATCAACTTTACATTTAGT 4064 >seq237 Length=61101 Score = 86.0 bits (94), Expect = 2e-11 Identities = 168/247 (68%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 451207 TCAAG-TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 ||||| || ||||||||| || | || || || || || || | || || |||| Sbjct 36457 TCAAGGTATCTTATAAAGGCGAGATGAAGACCTTCTTCCCCGAGGAGGTGTCCTCCATGG 36516 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325 | || || || ||||| || ||||| || ||| | || | || || || || | Sbjct 36517 TCCTAACGAAGATGAAGGAGACAGCGGAGGCGTATTTGGGCAAGACCGTGACGGACGCCG 36576 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 | |||||||| || ||||||||||| || | || |||| || || || ||||| || Sbjct 36577 TTATTACTGTGCCAGCTTATTTCAACGACTCTCAGAGGCAGGCGACGAAGGATGCCGGCG 36636 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 ||| |||||| | ||| |||| | || || || || || || ||||| || |||| | Sbjct 36637 TTATCGCTGGTCTGAATATTCTCAGGATAATAAACGAGCCGACGGCAGCCGCGATAGCGT 36696 Query 451446 ATGGACT 451452 | || || Sbjct 36697 ACGGGCT 36703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974786747518832