Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3434 120 4e-22 >seq3434 Length=17783 Score = 120 bits (132), Expect = 4e-22 Identities = 196/282 (70%), Gaps = 9/282 (3%) Strand=Plus/Plus Query 40145 AAAGTGCTCGATCATGGGTTTGTTCGTCTCGTTGATCACATGCCTCGACAAGATTTGGAT 40204 ||| ||||||||||||| ||| | || | ||||| | ||| |||| ||| Sbjct 8647 AAAATGCTCGATCATGGCTTTTTGCGGGTTGTTGACTATATGGG------AGAT---GAT 8697 Query 40205 GCGTCCATCGTCCAATCCGCCCGTGTTTCCTATGGCGACGGTACCAAAACCACCCGTGGA 40264 ||| | || || || | || |||||||||||||| ||| || || | | || | | Sbjct 8698 GCGGCGATTGTGCAGGCTGCACGTGTTTCCTATGGGCGCGGCACAAAGAAAAGCCTTCAA 8757 Query 40265 GACCGTGGGCTCATCCGATATCTCCTTAGGCACTGGCATACGACCCCTTTTGAAATGGTC 40324 || || |||||||| ||| | | | ||| | |||||||||||||| |||||| Sbjct 8758 GATAAAGGTCTCATCCGCTATTTGATGCGCCACCGTCATACGACCCCTTTCGAAATGTGT 8817 Query 40325 GATTTCAAGTTTCACATCAAAATGCCCATCTACATCGCACGACAGCACCTTCGGCACCGC 40384 || | || |||||| |||||||||| || | | || || ||| |||||||| || Sbjct 8818 GAAATTAAATTTCACGTCAAAATGCCGATTTTTGTTGCGCGTCAGTGGCTTCGGCATCGT 8877 Query 40385 ACCGCCAGTGTGAATGAGTTGTCTGCTCGTTACTCCGTGGTT 40426 | ||||| |||||||| | ||||| |||||||| ||| || Sbjct 8878 ATGGCCAGCGTGAATGAATATTCTGCCCGTTACTCAGTGCTT 8919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588705041591200