Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4290 86.0 7e-12 >seq4290 Length=14807 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG 159609 ||||| || ||||| || ||| | || ||||| || | || | | |||||| | Sbjct 5456 ATGATCACGTATCCGTCGACAAACGGAGTATTCGAGGAGACAATTGGCGACATATGTGAC 5397 Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 || || || | || || |||||||| || || || || ||| | ||||| || || Sbjct 5396 ATGGTGCACGGTGCCGGCGGGCAGGTATACCTGGACGGCGCTAATATGAATGCTCAAGTC 5337 Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729 || | ||| | ||||| || ||||| | ||||| ||||| || ||||| Sbjct 5336 GGCTTGTGCCGACCCGGCGACTACGGCAGCGATGTGTCACATCTCAACTTGCACAAGACG 5277 Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||||||| || |||||||| || || ||| | |||||||| || || Sbjct 5276 TTCTGTATTCCTCACGGAGGTGGCGGACCCGGCATGGGTCCTATCGGAGT 5227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587780667045440