Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2779 201 3e-46 seq1592 163 6e-35 seq12857 161 2e-34 seq121 109 1e-18 >seq2779 Length=20704 Score = 201 bits (222), Expect = 3e-46 Identities = 176/219 (80%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| |||||| | |||||| || || || ||||||||||| ||||||| ||||||||| Sbjct 8158 AGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAAAGAGTTCTG 8217 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| ||||||||||| || || || || ||||| || || |||||||| |||||| Sbjct 8218 CCATCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCT 8277 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || |||||| || |||||||| |||||||| ||| ||| |||||||| ||| Sbjct 8278 TTGTCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACTTCAAGAGTA 8337 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || ||||| | |||||| || || | |||||| Sbjct 8338 ATGGTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCATT 8376 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| ||||| || || || ||||||||||||| ||||||||| |||||||| Sbjct 8623 ACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCCATCTTCC 8682 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| || || || || || || ||||||||||| ||||||||| Sbjct 8683 AGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGTGGAATGCCTTCCTTGTCTTGA 8742 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || || ||||| || ||||| ||| ||| || |||||||| | || || Sbjct 8743 ATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCTACCTCAAGGGTGATGGTTTTC 8802 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | |||||| ||||| | |||||| Sbjct 8803 CCAGTGAGAGTTTTCACGAAGATTTGCAT 8831 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| ||||| || || || ||||||||||||| ||||||||| |||||||| Sbjct 8395 ACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCCATCTTCA 8454 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || ||||| || || || || || || || ||||| || |||||||| || Sbjct 8455 AGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCCTGG 8514 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| || || || ||||| || ||| ||| ||||||||||| | || || Sbjct 8515 ATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCAACTTCAAGGGTGATGGTTTTG 8574 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| | ||| ||||| || | |||||| Sbjct 8575 CCTGTGAGAGTCTTTACAAAGATCTGCATT 8604 >seq1592 Length=29089 Score = 163 bits (180), Expect = 6e-35 Identities = 169/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCT 194981 |||| |||||| | || |||||||| || ||||||||||||||||||| |||| || | Sbjct 196 AGTCGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAG-GTGCG 254 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || || |||||||| || ||||| || | || || || || ||||| |||||||| Sbjct 255 TCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTC 314 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||||||||| ||||| ||||| || || || ||| || ||||| | || Sbjct 315 TTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGT 374 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| ||||| ||||| ||||| | |||||| Sbjct 375 AATAGTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 141 bits (156), Expect = 2e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | ||| |||||||| ||||| ||||| |||| ||| || | || ||||| Sbjct 432 AACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCGGAAAGCGTGCGGCCGTCTTC 491 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || || || ||||| | || ||| || ||||| || ||||||||||| || || Sbjct 492 AAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGGGGATGCCTTCTTTATCCTG 551 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||||| ||||| || ||||| ||| ||| || || | || | ||||| Sbjct 552 AATTTTCGCTTTGACATTCTCGATCGTGTCTGAAGCTTCAACCTCCAATGTGATGGTCTT 611 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| ||||| ||||| || || | |||||| Sbjct 612 TCCCGTCAAGGTTTTGACAAAGATCTGCATT 642 Score = 132 bits (146), Expect = 1e-25 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCC 194983 ||| | ||| || || |||||||| || || |||||||||||||||| |||| || | | Sbjct 654 TCTGAGAACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGACAAG-GTACGTC 712 Query 194984 CATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTT 195043 | ||||| ||||| || || ||||| || | || || ||||| || ||||| || |||| Sbjct 713 CGTCTTCAAGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCCTCTT 772 Query 195044 TGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAA 195103 |||| ||||| || ||| |||||||| || ||||| || ||| ||||| || || | Sbjct 773 TGTCCTGAATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAACTTCGAGAGTTA 832 Query 195104 CCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || || || | ||||| Sbjct 833 TAGTTTTTCCAGTTAATGTCTTCACAAAAATCTGCAT 869 Score = 116 bits (128), Expect = 8e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 194956 TGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAG 195014 |||||||||||||||| |||| || | || || || |||||||| || ||||| || | Sbjct 1 TGAATATTGTAATCGGACAAG-GTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAA 59 Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074 || || || || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 60 TCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAAT 119 Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134 || || || || ||||| | || | || || || || | ||| || ||||| | Sbjct 120 CGTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAAT 179 Query 195135 TTGCAT 195140 ||||| Sbjct 180 CTGCAT 185 >seq12857 Length=4317 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| |||||||| ||||| | | ||| | || || ||| Sbjct 3608 ACAAGATGTAGTGTAGATTCTTTCTGAATATTATAATCTGACAAAGTACGTCCGTCCTCG 3667 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || |||| ||| || || ||||||||||| |||||||||||| Sbjct 3668 AGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGAATGCCCTCTTTGTCTTGA 3727 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| || ||||| || || |||||| || || || | || | || ||| Sbjct 3728 ATTTTAGCCTTTACATTCTCGATCGTATCCGAAGCCTCTACCTCCAAAGTGATAGTTTTT 3787 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||||||||| ||||| | |||||| Sbjct 3788 CCTGTCAAAGTTTTGACGAAAATTTGCAT 3816 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||| ||| | || ||||| || || || |||||||||||||| | ||| || | Sbjct 3827 AGCCTCAGAACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGA 3886 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || || || || || || || | || ||||| || ||||| ||||||||| Sbjct 3887 CCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCT 3946 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| |||||||| ||||| || ||||| || || || || ||||| | || Sbjct 3947 TTGTCCTGAATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTG 4006 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||| || ||||| | ||||| Sbjct 4007 ATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 Score = 105 bits (116), Expect = 1e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || || |||||||||||||| | ||| || | ||||||||||| || || || Sbjct 4075 AGTTGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCTTCGAGTTGTTTTCC 4134 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||| ||||| | || || || || ||||| || ||||| || || |||||||| || Sbjct 4135 TGCAAAGATCAATCTCTGCTGATCCGGAGGGATACCTTCCTTATCCTGAATTTTGGCTTT 4194 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 ||| ||||| || || || || || ||||| | || | || || || || | ||| Sbjct 4195 GACATTCTCTATCGTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGT 4254 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 4255 CTTGACGAAAATCTGCAT 4272 >seq121 Length=74473 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| || || ||||| | ||||| | |||||||| ||||| || || || |||| Sbjct 8121 CTTTTTGGATGTTATAATCAGAGAGAGTACGTCCATCTTCCAGCTGTTTTCCAGCAAAGA 8180 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 ||||||| || || ||||| ||||| || ||||| || ||||| || || || || | Sbjct 8181 TAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATCTTGGCTTTCACATTTT 8240 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | ||||| || || ||| || || || |||| || || || || | ||||| |||| Sbjct 8241 CGATGGTATCAGAGGCTTCTACCTCGAGAGTAATGGTTTTACCAGTGAGGGTTTTGACGA 8300 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 8301 AAATCTGCAT 8310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108958422564668