Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016014.1 Length=7784 Score E Sequences producing significant alignments: (Bits) Value seq8046 100 1e-17 >seq8046 Length=7925 Score = 100 bits (110), Expect = 1e-17 Identities = 326/496 (66%), Gaps = 14/496 (3%) Strand=Plus/Plus Query 2110 ACGGGGAAATC-TATGTTCTGCATGAGCTTGCTTGGCTTTT--TTGGTGGCAGGGTCATT 2166 || || ||||| ||| ||||||||||| | || || || | |||||| || || Sbjct 4180 ACAGGCAAATCATAT-TTCTGCATGAGTCT--TTTGCAGTTCCTAGGTGGCGCTGTAATA 4236 Query 2167 TCTTTTGCAAATTCCAAAAGCCAATTTTGGATGCAGCCATTAGCTGACGCGCGCCTGGCA 2226 || | ||| ||||||| ||||| |||||| ||||||| ||||||||| | | | Sbjct 4237 TCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGA 4296 Query 2227 TTGCTTGACGATGCCACCAGAGCGACGTG--GGAC-TATTTTGACATGTATCTCAGAAAT 2283 | || |||||||| || || ||| |||| ||| |||| | ||||| || || Sbjct 4297 CTACTGGACGATGCGACG---GCCCAGTGCTGGACGTATATTGATACATATCTTAGGAAC 4353 Query 2284 GCATTAGATGGCAATCCTATCTCTGTAGATCTAAAGCACAGGGCACCCACGCAAATAAAA 2343 | ||||||| || || || | |||| || || | | | | ||| |||||| Sbjct 4354 CTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGCAGATAAAA 4413 Query 2344 TGTCCACCGTTGCTAATAACAACCAATTTAAACATTACACATGACGACAGGTGGCGCTAC 2403 ||||| || || | ||||||||||| |||| | | | || ||||| ||| || Sbjct 4414 TGTCCTCCATTAATGATAACAACCAACATAAATCCTCTAGAGGAGGACAGATGGAAGTAT 4473 Query 2404 CTGTTTACAAGAGTAAAGCTTTTTGAGTTTAAGTATGACTTTCCCTTTAACGAGGA-AGG 2462 || | ||||||| || ||| |||||| | |||||||| | || ||| Sbjct 4474 TTGCGCAGCAGAGTAACACTGTTTAAGTTTACCAACCCATTTCCCTTCG-CAAGCCCAGG 4532 Query 2463 ACAGCCCCTATACAAGCTTAATCATGAGAGTTGGAAATCtttttttAAAAGGTTGTGGTT 2522 ||||||||||| | ||| ||| | ||||||| ||||| |||||| ||||| Sbjct 4533 GGAGCCCCTATACCCTATAAATAATGCAAACTGGAAATGCTTTTTCCAAAGGTCGTGGTC 4592 Query 2523 ACAATTAGACCTAAGTGATCAAGAGGACGAGGGGGAAGATGGAGAGCCTGAGCAAACGTT 2582 | ||||||||| || |||||| ||| || ||||| | ||| | |||| Sbjct 4593 CCGCCTAGACCTAAACAGTCCAGAGGATCAGGAAGACAATGGAAACACTGGCGAGCCGTT 4652 Query 2583 TAAATGCGGTCCAAGA 2598 || ||||| ||| || Sbjct 4653 TAGATGCGTGCCAGGA 4668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24783334333888