Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016075.1 Length=7774 Score E Sequences producing significant alignments: (Bits) Value seq8046 100 1e-17 >seq8046 Length=7925 Score = 100 bits (110), Expect = 1e-17 Identities = 352/538 (65%), Gaps = 14/538 (3%) Strand=Plus/Plus Query 2203 GGACCCCCAAACACGGGCAAGTCCATGTTCTGCATGAGTCTGCTTAGC--TTCTTTGGAG 2260 ||||| || | || ||||| || |||||||||||||| || || ||| | || | Sbjct 4168 GGACCTGCAGATACAGGCAAATCATATTTCTGCATGAGTCT--TTTGCAGTTCCTAGGTG 4225 Query 2261 GAAAGGTCATTTCCTTTGCAAATGCCAAGAGCCAATTTTGGATGCAGCCATTAGCTGACG 2320 | || || || | ||| ||| ||| ||||| |||||| ||||||| ||||||||| Sbjct 4226 GCGCTGTAATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACA 4285 Query 2321 CGCGGCTGGCATTATTAGATGATGCCACCGGACCAGCG-TGGGATTATTTGGATACATAC 2379 | | | | || | || ||||| | ||| |||| | ||| ||| | |||||||| Sbjct 4286 GTAAGATAGGACTACTGGACGATGCGA-CGGCCCAGTGCTGGACGTATATTGATACATAT 4344 Query 2380 TTTAGAAATGGCCTGGATGGCAACCCGATAAGCGTAGATATGAAACATAAGGCCC--CCA 2437 |||| || || ||||| ||||| | || |||| | |||||||||| ||| | Sbjct 4345 CTTAGGAACCTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTG 4404 Query 2438 CAGAAATAAGATGTCCGCCACTGTTGATAACCTCAAACCTTAACATAAGACATAACGACA 2497 ||| |||| |||||| ||| | ||||||| | ||| | || | | | |||| Sbjct 4405 CAG--ATAAAATGTCCTCCATTAATGATAACAACCAACATAAATCCTCTAGAGGAGGACA 4462 Query 2498 GATGGCGCTACCTGTACACTAGAGTTCAGCAGTTTGAGTTTA-AAAGTGACTTCCCCTTT 2556 ||||| || || || ||||| | |||| |||||| || | ||||| | Sbjct 4463 GATGGAAGTATTTGCGCAGCAGAGTAACACTGTTTAAGTTTACCAACCCATTTCCCTTCG 4522 Query 2557 AATGACGAAGGCCAACCCCTGTACAGGCTTAATCATAAGAATTGGAAATCtttttttAAA 2616 | | | ||| | ||||| ||| | ||| || || ||||||| ||||| || Sbjct 4523 CAAG-CCCAGGGGAGCCCCTATACCCTATAAATAATGCAAACTGGAAATGCTTTTTCCAA 4581 Query 2617 AGGTTGTGGTTACAGTTAGAGCTAAGTGATCAAGAGGACGAGGGGGAAGATGGAGAACCT 2676 |||| ||||| | |||| |||| || |||||| ||| || ||||| | || Sbjct 4582 AGGTCGTGGTCCCGCCTAGACCTAAACAGTCCAGAGGATCAGGAAGACAATGGAAACACT 4641 Query 2677 GAGCAAACGTTTAAATGCTCTGCAAGACGCCCTT-CTCAATCTGTATGAAGAGGGTAG 2733 | | |||||| |||| ||| || | | || || | ||||||||| | | ||| Sbjct 4642 GGCGAGCCGTTTAGATGC-GTGCCAGGAGACGTTGCTAGAACTGTATGAAAAAGATAG 4698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24751347583328