Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016898.1 Length=7855 Score E Sequences producing significant alignments: (Bits) Value seq8046 102 4e-18 >seq8046 Length=7925 Score = 102 bits (112), Expect = 4e-18 Identities = 188/274 (69%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 2925 GGACCGCCAGATACAGGGAAATCCATGCTCTGTATGGGGCTGATACGTGTACTAGGGGGG 2984 ||||| |||||||||| ||||| |||| ||| | || | | | ||||| || Sbjct 4168 GGACCTGCAGATACAGGCAAATCATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGC 4227 Query 2985 AGGGTGTTATCATTTGCAAATTCAAAAAGTCAGTTTTGGTTGCAACCATTGGCAGATACA 3044 || |||||| ||| ||||| | || || |||||| |||| || || || || | Sbjct 4228 GCTGTAATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGT 4287 Query 3045 AAGGTCGCACTTATAGATGATGCTACGGGGCCCTGTTGGGATTATATGGATACATATTTA 3104 ||| | | ||| | || ||||| |||| | || ||| ||||| ||||||||| | Sbjct 4288 AAGATAGGACTACTGGACGATGCGACGGCCCAGTGCTGGACGTATATTGATACATATCTT 4347 Query 3105 AGAAATGCCT--TAGACGGGAATCCGATATGTATAGATAGAAAGCATAGAGCCCCGCTGC 3162 || || ||| |||| || || || | ||||||| || || |||| ||| ||||| Sbjct 4348 AGGAA--CCTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGC 4405 Query 3163 AGATAAAGTGCCCGCCCATTATCATAACAACAAA 3196 ||||||| || || || | || |||||||| || Sbjct 4406 AGATAAAATGTCCTCCATTAATGATAACAACCAA 4439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25010440262864