Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq532 89.7 6e-13 >seq532 Length=46805 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 37428 TTTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATA 37487 ||||||| ||| | |||||||| || || ||||| |||||| ||||| |||||| Sbjct 27944 TTTTCTTTTTGATCGGAAATATAAGTTTCGATGAGTAAGGAATACATCTCAGAATGAATA 27885 Query 37488 TTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTA 37547 ||||| || || ||||| || || || ||||| | ||||| | | || || || | | Sbjct 27884 TTTTCTATGGCGATCTGGAAGCCGTAGAAACAACGTGCTTCCGCGATTTTCACCTCTTGA 27825 Query 37548 AAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGA 37607 || |||| | | || |||||||| || ||||| ||| |||||||| || | Sbjct 27824 CTGAATCTCTCAATCAGATTCTCATTAACGATTCCATCGGAAGCAGCAAAGAACGCCAAG 27765 Query 37608 ACATATTTTATAAAATGTCTTTCATCA 37634 |||| ||||| | |||||| ||| Sbjct 27764 ACATGAGAGATAAAGTATCTTTCGTCA 27738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592044304656160