Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_017716.1 Length=8008 Score E Sequences producing significant alignments: (Bits) Value seq8046 480 4e-132 >seq8046 Length=7925 Score = 480 bits (532), Expect = 4e-132 Identities = 864/1243 (70%), Gaps = 26/1243 (2%) Strand=Plus/Plus Query 5867 AACAAAGTGTCTGTGCCCAAGGTGTCTGGGTTGCAATATCGTGTGTTTCGTGTGCGGTTA 5926 || || |||||||| |||||||| || || | || || |||||||| | ||| | | Sbjct 10 AATAAGGTGTCTGTACCCAAGGTATCGGGCTACCAGTACCGTGTGTTCCATGTAAAGCTG 69 Query 5927 CCTGACCCTAACAAGTTTGGCCTTCCAGATGCAAGCTTGTATGACCCAGCTTCGCAGCGT 5986 || ||||| || |||||||| || || ||||| | | | ||||| || | | |||||| Sbjct 70 CCGGACCCCAATAAGTTTGGTCTGCCTGATGCCAACCTCTATGATCCCGACACCCAGCGT 129 Query 5987 CTGGTGTGGGCTTGTGTTGGGTTGGAAGTGGGTCGCGGACAGCCCTTAGGCGTGGGTACC 6046 ||| ||||||| ||||| || | || |||||||| || ||||| | || ||||| | Sbjct 130 CTGCTGTGGGCCTGTGTCGGAGTTGAGGTGGGTCGTGGCCAGCCTCTGGGTGTGGGGATA 189 Query 6047 AGTGGTCATCCCCTGCTA-AACAAACTGGATGACACAGAAAATGGCCCCTCGCCTCCCGC 6105 ||||| ||| | ||| |||| ||||||||| || ||||||| | | || | Sbjct 190 TCCGGTCA-CCCTTACTATAACAGACTGGATGATACTGAAAATGCACACAATCC-----C 243 Query 6106 GGGCCAGGGTGTTGATAATAGGGAGTGTGTGTCTATGGACTACAAGCAAACACAGCTGTG 6165 | ||| || |||| |||||| | | || ||||| || || || |||||||||| Sbjct 244 GACACAGC-TGATGATGGGAGGGAGAATATATCCATGGATTATAAACAGACACAGCTGTT 302 Query 6166 CATGCTGGGTTGCAAGCCCCCTCAGGGCGAGCATTGGGGTAAGGGCA--ACCCGT-GCCA 6222 || |||| |||||||| ||| || || |||||| ||||||| ||| | || Sbjct 303 TATTTTGGGATGCAAGCCTCCTATAGGTGAACATTGGTCCAAGGGCACTACCTGCAGCGG 362 Query 6223 GTCTGGTGCTGCAGGCGATTGCCCTCCGTTGGAGCTGGTGAACTCTGTAATACAGGATGG 6282 ||| ||||| || || || ||||| | || | ||| | || ||||||| Sbjct 363 GTCATCTGCTGTTGGTGACTGTCCTCCCCTTCAGTTTACAAACACCACTATTGAGGATGG 422 Query 6283 GGATATGGTGGATACTGGATATGGGGCCATGGACTTTGGCTCTTTGCAGGTTAACAAATC 6342 ||||||||| || || || | |||||| |||| |||| | || | ||| |||||||| Sbjct 423 GGATATGGTTGAAACCGGGTTCGGGGCCCTGGATTTTGCCGCTCTACAGTCCAACAAATC 482 Query 6343 AGATGTACCTCTAGATATATGCACTAGCGTATGTAAGTACCCTGACTATTTGAAAATGGC 6402 ||||| || || ||||| || |||| | ||||||| || || |||||| |||||||||| Sbjct 483 TGATGTCCCCCTGGATATTTGTACTAACATATGTAAATATCCGGACTATCTGAAAATGGC 542 Query 6403 CTCGGAACCATATGGTGACAGTTTGTTTTTCTACTTACGTCGCGAGCAAATGTTTGTTAG 6462 | || || ||||| || | |||| || | | | || | ||||| ||||| | Sbjct 543 TGCTGACCCCTATGGCGATTCTATGTTCTTTTCCCTGCGCAGGGAGCAGATGTTCACCCG 602 Query 6463 GCACCTATTTAA-CAGGGCGGGTACCATGGGCGATGCAATTCCAGAGGAGCTTTATATTA 6521 ||| | ||||| | ||| |||| | ||||| || || | || |||||||| ||| | | Sbjct 603 GCATTTTTTTAATCGGGGTGGGT-CGATGGGTGACGCCCTCCCGGAGGAGCTATATGTCA 661 Query 6522 AGGGTTCTGGTGGCACTGCAAAGCTTGCCAGCCATGTGTTTTACC-CCACACCCAGTGGC 6580 | ||||| | | | | | | | || |||| || ||| |||| ||||||||| Sbjct 662 AAAGTTCTACCGTC-CAG--ACCCCCGGTAGTTATGT-TTACACCTCCACTCCCAGTGGC 717 Query 6581 TCTATGGTAACCTCAGAGGCCCAACTGTTTAACAAGCCATACTGGTTACAAAGGGCCCAG 6640 ||||||||| |||| || || | ||||||||||| |||||| | | |||||||||| Sbjct 718 TCTATGGTATCCTCTGAACAGCAGTTATTTAACAAGCCTTACTGGCTGCGAAGGGCCCAG 777 Query 6641 GGCCACAACAATGGCATTTGCTGGGGTAACCAGGTATTTTTAACTGTAGTAGATACCACA 6700 || || ||||||||||| |||||||| || | ||| || | || || || || ||||| Sbjct 778 GGACATAACAATGGCATGTGCTGGGGCAATCGGGTCTTCCTGACAGTGGTGGACACCACG 837 Query 6701 CGGAGCACCAATATGACACTCTGTGCTGCCACT---ACCACTGATGCAACCTATAAGAAC 6757 || ||||| | ||| | || |||| ||||||| | ||| || | | |||||| | Sbjct 838 CGCAGCAC--AAATGTCTCTTTGTG-TGCCACTGTAAACACAGAAACTAATTATAAGGCC 894 Query 6758 GATAACTTTAAAGAGTACCTGCGCCACGTGGAAGAATATGACATACAATTTATATTTCAA 6817 || | ||| || ||||| | || |||| || ||||| | || || || |||||| Sbjct 895 TCCAATTATAAGGAATACCTTAGGCATATGGAGGAGTATGATTTGCAGTTCATTTTTCAA 954 Query 6818 TTGTGTAAAATTACGTTAACAACTGATGTTATGGCCTATATTCACAGCATGGATGCGGGT 6877 |||| ||||| || | || | || | ||||| || || || | |||||||||| | Sbjct 955 CTGTGCAAAATAACACTTACCCCCGAGATAATGGCATACATACATAACATGGATGCGCGG 1014 Query 6878 ATTTTGGAGGAATGGAACTTTGGTTTGCAGCCCCCGCCGTCTGGTAGTTTGCAGGACACC 6937 | | ||||| |||||||||||| | | || || ||||| | || ||||| |||||| Sbjct 1015 TTGCTTGAGGACTGGAACTTTGGTGTACCCCCGCCCCCGTCCGCCAGCTTGCAAGACACC 1074 Query 6938 TATAGGTTTGTTACCTCTGCTGCCATAACATGTCAAAAGACCGCCCCACCTAAGGAAAAG 6997 || |||| | | || || ||||||||||| ||| || | || ||||| || Sbjct 1075 TACAGGTATCTGCAGTCCCAAGCGATAACATGTCAGAAGCCCACACCCCCTAA-GACCCC 1133 Query 6998 GAGGGCCCCCTGGCTAAGTAT-ACCTTTTGGGAGGTTGATCTTAGGGAAAAGTTTTCTGC 7056 | | |||| || || || || ||||| || ||||| || |||| ||||| Sbjct 1134 TACTGATCCCTATGCAACCATGACATTCTGGGATGTGGATCTCAGTGAAAGTTTTTCCAT 1193 Query 7057 AGATTTGGACCAGTTTCCCCTGGGTCGCAAGTTTTTGCTGCAG 7099 ||| |||| || || |||||||| |||||||||||| ||||| Sbjct 1194 GGATCTGGATCAATTCCCCCTGGGACGCAAGTTTTTGTTGCAG 1236 Score = 385 bits (426), Expect = 2e-103 Identities = 793/1160 (68%), Gaps = 26/1160 (2%) Strand=Plus/Plus Query 1589 AAATGTGGGAAGAATAGGTTAACCGTTGCCAAGTGTATGAGCACGTTGCTAAATGTGCA- 1647 || |||| ||||| ||| ||||| ||||| ||||||| | || |||| | | Sbjct 3583 AACTGTGCAAAGAACAGGGACACCGTCTCCAAGAACATGAGCATGCTGTTAAACATTCCC 3642 Query 1648 -AGAACCATACTTATTGATTGAACCACCAAAGTTGCGTAGCACAGCAGCAGCCCTATATT 1706 |||| |||| | | || ||||||||||| | | || ||| | || ||| | || | Sbjct 3643 GAGAAGCATA--TGCTCATAGAACCACCAAAACTAAGAAGTACACCTGCTGCCTTGTACT 3700 Query 1707 GGTACAGAACAGGTATATCCAATGTAAGTGAGGTAATAGGGGAACCACCTGAGTGGATTG 1766 |||||| ||| || |||| |||||||| ||||| |||| || ||||| | Sbjct 3701 GGTACAAGACATCCATGGGTAATGGGAGTGAGGTCTATGGGGAGACACCAGAATGGATAG 3760 Query 1767 TAAGACAAACCATGTTTCAACATAGCCTAGAGGAT-AGTATTTTTGATT---TGTCCCAA 1822 | ||||| || || | ||| || | |||||| || | || ||| |||| Sbjct 3761 TGAGACAGACACTGATAGGACACAGTATGGAGGATGAGCAGTTCAAATTATCTGTC---- 3816 Query 1823 ATGGTGCAGTGGGCATATGACCACGACCTGGTGGACGACAGTGCCATAGCCTACCAGTAT 1882 |||||||||| ||||||||||| ||| | |||||| || || | || | |||| Sbjct 3817 ATGGTGCAGTACGCATATGACCATGACATAACGGACGAGAGCGCACTGGCATTTGAGTAC 3876 Query 1883 GCACAACTGGCCGATGTAGACAGCAACGCGGCAGCATTCCTAAAAAGCAA-TGCACAGGC 1941 ||||| ||||| || || ||| ||| ||||||||||| ||||| ||||| ||| ||||| Sbjct 3877 GCACAGCTGGCGGACGTGGACGCCAATGCGGCAGCATTTCTAAACAGCAACTGC-CAGGC 3935 Query 1942 CAAATATGTAAAAGACTGTGCTACAATGTGCAGGCATTATAAGAGGGCAGAAAGACAGGC 2001 ||| || |||||||| | ||||||||||| || || ||| | ||||| || | Sbjct 3936 CAAGTACCTAAAAGACGCGGTGACAATGTGCAGACACTACAAGCGTGCAGAGAGGGAACA 3995 Query 2002 AATGACAATGTCACAGTGGATAAGGGCCAGATGTGACAAAACAAACGACGGGGGAGACTG 2061 ||||| ||| |||||||| | ||| | ||| | | || | ||||| || Sbjct 3996 AATGAGTATGAGCCAGTGGATCAAATTTAGAGGGAGCAAGATATCAGAGGAAGGAGATTG 4055 Query 2062 GAGGCCCATAGTGCAATTTTTACGGTACCAAAATGTGGAGTTTATAACATTTCTAGCTGC 2121 || ||| ||||| | |||||| || | || || ||||| | |||| || ||||| Sbjct 4056 GAAGCCTATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGTGTCATTCCTTGCTGC 4115 Query 2122 ATTCAAACACTTTTTAAAGGGCATTCCaaaaaaaaaCTGCATAGTGTTATATGGCCCACC 2181 || || |||||||| || | || || || || ||||||||||| ||||| || | Sbjct 4116 CTTTAAGTCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGC 4175 Query 2182 TAATACGGGCAAATCACATTTCGGAATGAGTTTAATGCACTTTTTACAAGGGTCCATCAT 2241 |||| ||||||||| ||||| | |||||| | |||| || || || | | || Sbjct 4176 AGATACAGGCAAATCATATTTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAAT 4235 Query 2242 TTCATACGTAAATTCCAACAGCCATTTTTGGCTGCAACCCCTAGCGGATGCCAAGGTGGC 2301 ||||| | ||||||| ||||| ||||||||||| ||| |||| || ||| | | Sbjct 4236 ATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGG 4295 Query 2302 CATGTTAGATGATGCCACGCCACAATGCTGGTCCTACATAGATAATTTTATGAGGAATGC 2361 | | || ||||| ||| | || |||||| | || || |||| | | | ||||| Sbjct 4296 ACTACTGGACGATGCGACGGCCCAGTGCTGGACGTATATTGATACATATCTTAGGAACCT 4355 Query 2362 ATTGGATGGCAATCCCATAAGTATAGATAGGAAACACAAAAACCTAATACAAATGAAGTG 2421 | | ||||| || ||| | |||||||| |||||||| || | ||| | || || || || Sbjct 4356 ACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGCAGATAAAATG 4415 Query 2422 CCCCCCGTTACTAATTACCTCAAACACAAATGCAGGAGAGGATGACAGGTGGCGGTACCT 2481 || || ||| | || || | |||| |||| | |||||| ||||| ||| ||| | Sbjct 4416 TCCTCCATTAATGATAACAACCAACATAAATCCTCTAGAGGAGGACAGATGGAAGTATTT 4475 Query 2482 GCACAGTAGACTAGTGGTGTTTAAATTTGAGCAA-CCGTTTCCCTTTG--ATCAGAATGG 2538 || ||| ||| || ||||||| ||| | ||| || |||||||| | | | | || Sbjct 4476 GCGCAGCAGAGTAACACTGTTTAAGTTT-ACCAACCCATTTCCCTTCGCAAGCCCA--GG 4532 Query 2539 AAATCCAGTTTATGAGCTAAATGATGAAAACTGGAAATCCTTTTTCTCAAGGACATGGTC 2598 | || | || ||||| ||| ||||||||||| ||||||| |||| | ||||| Sbjct 4533 GGAGCCCCTATACCCTATAAATAATGCAAACTGGAAATGCTTTTTCCAAAGGTCGTGGTC 4592 Query 2599 CAGATTAGACTTACAAGAGGAC-GAGGACACTGAACACGATGGAAGCACTTTCAGAG-CG 2656 | | ||||| || || || | ||||| ||| || |||||| |||| | ||| || Sbjct 4593 CCGCCTAGACCTA-AACAGTCCAGAGGATCAGGAAGACAATGGAAACACTGGC-GAGCCG 4650 Query 2657 TTTAAGTGCGTACCAGGACAGAATACTAACATTGTATGAAGAAGAGAGCAA-GCTGTTGA 2715 |||| ||||| |||||| | | ||| | |||||||| |||| ||||| |||| Sbjct 4651 TTTAGATGCGTGCCAGGAGACGTTGCTAGAACTGTATGAAAAAGATAGCAACAAACTTGA 4710 Query 2716 GTGACCAAATTGAACACTGG 2735 | ||||||||| |||| ||| Sbjct 4711 G-GACCAAATTAAACATTGG 4729 Score = 196 bits (216), Expect = 2e-46 Identities = 227/305 (74%), Gaps = 11/305 (4%) Strand=Plus/Plus Query 5622 TGGGGGAGATTTTTACTTGCACCCCAGCTATTTT----GGCATACGCAAACGACGTAAAC 5677 |||||| |||| ||||||| || || ||| || ||| || |||||||||||| Sbjct 7610 TGGGGGTGATTACTACTTGCTGCCAAGTTATGTTCTGTGGCCTA----AACGACGTAAAC 7665 Query 5678 GTGTACACCATTCCTTTGCAGATGTCTTTGTGGCGGCCTAGCGAATCCAAGGTATACCTA 5737 |||| ||| ||| ||||||||||| || |||||||||||| ||| |||||||||||| Sbjct 7666 GTGTGCACTATTTCTTTGCAGATGGCTATGTGGCGGCCTAATGAAAGCAAGGTATACCTG 7725 Query 5738 CCACCGGCCCCTGTGTCCAAGGTGGTCAGCACGGATGAGTATGTCAGTCGCACAAGCATT 5797 || || | ||||| || |||||| |||| ||||||| ||||||| || || | || Sbjct 7726 CCTCCAACACCTGTCTCAAAGGTGCTCAGTACGGATGTCTATGTCACGCGGACGAATGTT 7785 Query 5798 TACTACCACGCTGCTAGCTCCAGGCTCCTGGCTGTTGGACATCCATACTATGCTGTA--- 5854 || || || | || ||||| |||||||| | || || |||||||| ||| || || Sbjct 7786 TATTATCATGGTGGGAGCTCTAGGCTCCTCACAGTAGGCCATCCATATTATTCTATAAAG 7845 Query 5855 AAAAAGGGCAACAACAAAGTGTCTGTGCCCAAGGTGTCTGGGTTGCAATATCGTGTGTTT 5914 ||||| ||| || || |||||||| |||||||| || || | || || |||||||| Sbjct 7846 AAAAATAGCACTAATAAGGTGTCTGTACCCAAGGTATCGGGCTACCAGTACCGTGTGTTC 7905 Query 5915 CGTGT 5919 | ||| Sbjct 7906 CATGT 7910 Score = 102 bits (112), Expect = 4e-18 Identities = 146/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 4360 AAGCGGGCATCGGCCACGCAGCTATATCAAACATGCAAGGCTGCAGGCACGTGCCCCCCT 4419 ||||| || || ||||| | |||||| |||||||||| || || |||||||||||| Sbjct 6333 AAGCGCGCCTCCCCCACGGACTTATATCGAACATGCAAGCAGGCTGGAACGTGCCCCCCT 6392 Query 4420 GACGTCATACCAAAGGTGGAGGGCACCAC-CATT-GCAGATCAAATACTGAAGTATGGCA 4477 || ||||||| | |||||| || || |||| || ||| |||||| || | |||| Sbjct 6393 GATATCATACCTAGGGTGGA--ACAGGACACATTAGCTGATAGAATACTAAAATGGGGCA 6450 Query 4478 GTATGGGGGTGTATTTTGGAGGCCTTGGCATTGGTACTGGCGCGGGGTCgggggggCGTG 4537 | | ||||| | ||| || ||||| || || |||||||| || | ||||| || Sbjct 6451 GCCTAGGGGTCTTTTTCGGTGGCCTCGGTATAGGTACTGGAAGCGGCACTGGGGGACGCA 6510 Query 4538 CGGGCTACGTTCCCTTGGGCAC 4559 | |||||| | || ||||||| Sbjct 6511 CAGGCTACATACCGGTGGGCAC 6532 Score = 86.0 bits (94), Expect = 3e-13 Identities = 122/171 (71%), Gaps = 3/171 (2%) Strand=Plus/Plus Query 5143 CATGAGGCACCCGATCCGGATTTCCTTGACATTGTGGCATTGCACAGACCCGCCTTGACC 5202 |||||| |||| || || || ||||| ||||| ||| || ||||| | || ||| | || Sbjct 7119 CATGAGCCACCGGACCCTGACTTCCTGGACATAGTGTCACTGCACCGCCCTGCCCTCACG 7178 Query 5203 TCA---CGTAAGGGCACCATACGCTTTAGCAGGCTGGGTCAACGTGCCACACTGCGAACC 5259 || || |||| || | ||||| || || |||| | || ||||| || || || Sbjct 7179 TCCACCCGGCAGGGTACTGTCCGCTTCAGTCGGTTGGGACGCCGGGCCACGCTTCGCACG 7238 Query 5260 CGCAGCGGCAAGCAAATTGGGGCCCGGGTGCACTTTTACCAAGATCTTAGC 5310 || || || || ||||||||||| |||| ||||| || || ||| | ||| Sbjct 7239 CGTAGTGGTAAACAAATTGGGGCTAGGGTACACTTCTATCATGATATCAGC 7289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25499837546432