Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq27420 82.4 2e-11 >seq27420 Length=994 Score = 82.4 bits (90), Expect = 2e-11 Identities = 199/299 (67%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 24979 TCGATTATTTGCAGCTTATGCGAATTGAAGGGTT-CAAAGAAGGCCGAGCTAATGAAGTA 25037 |||| || |||||| | |||| | || ||| ||| ||| ||| |||| || | Sbjct 980 TCGACTACTTGCAGTTGATGC-AGGTGCCGGGCAACAAGGAAAACCGCGCTACCGAGATT 922 Query 25038 TCAGAAATTTCGAAATCACTTAAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCG 25097 || || |||||| || | || | ||||||||||| | ||| || |||||||| Sbjct 921 TCCGAGATTTCGCGTTCGTTGAAGGGCTTGGCGAAAGAACTCAATGTGCCGGTGATCGCG 862 Query 25098 TTATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGAC 25157 | || ||||| ||||| || ||| | | ||| ||||| || || | || || Sbjct 861 CTGTCCCAGCTCAACCGCTCGCTGGAACAGCGTGCGGACAAGCGGCCGATGATGTCCGAT 802 Query 25158 TTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGAC 25217 |||| || || ||||| || || |||||||| ||| | ||| || || ||||| ||| Sbjct 801 CTGCGTGAATCGGGCGCTATCGAGCAGGATGCCGATGTCATCATGTTCATCTACCGTGAC 742 Query 25218 GAAGTGTATAACCCCGACAGCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAAACA 25276 || || ||| || | |||||||| | ||||| || ||||| ||||| || Sbjct 741 GAGTACTACAACAAGGAATCGCCCGACAAAGGGCTGGCCGAAATCATCATCGGCAAGCA 683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101485226742144