Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2779 190 2e-43 seq12857 136 3e-27 seq1592 131 1e-25 seq121 114 1e-20 seq1483 93.3 3e-14 >seq2779 Length=20704 Score = 190 bits (210), Expect = 2e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || |||||||| ||||| |||||||| ||||| ||||| ||||||| | ||||||| || Sbjct 8161 CGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAAAGAGTTCTGCCA 8220 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||| |||||||| ||||| || | ||| || |||||||| ||||| |||||||| Sbjct 8221 TCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCTTTG 8280 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || || |||||| |||||| | || | ||||| || | ||| ||||||||||| | Sbjct 8281 TCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACTTCAAGAGTAATG 8340 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 |||||||| || | |||||| ||||| |||||||| | | |||||| Sbjct 8341 GTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCATTCCTCCACGAAGA 8388 Score = 167 bits (184), Expect = 2e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||| | || | |||||| || ||||| || || ||||||||||||| Sbjct 8603 TTCCTCCACGAAGACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGG 8662 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||||||| |||| |||| || || || ||||| |||| ||||| ||||| || | Sbjct 8663 AAAGAGTTCTGCCATCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGTG 8722 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || |||||||| || ||| ||| | |||| ||||||||| | ||| | Sbjct 8723 GAATGCCTTCCTTGTCTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCTA 8782 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| |||| ||||| || || | |||||| || || || |||||| Sbjct 8783 CCTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATTTGCATG 8832 Score = 161 bits (178), Expect = 8e-35 Identities = 181/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||| | || | |||||| || ||||| || || ||||||||||||| Sbjct 8375 TTCCTCCACGAAGACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGG 8434 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||||||| |||| || | ||| || || || || |||| |||||| ||||| || | Sbjct 8435 AAAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGG 8494 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||| || || ||||| || ||| |||||| || || || | ||| | Sbjct 8495 GAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCAA 8554 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 ||||||| |||| |||||||| || | ||| |||||||| |||||||| | | |||| Sbjct 8555 CTTCAAGGGTGATGGTTTTGCCTGTGAGAGTCTTTACAAAGATCTGCATTCCTCCACGAA 8614 Query 101481 GA 101482 || Sbjct 8615 GA 8616 >seq12857 Length=4317 Score = 136 bits (150), Expect = 3e-27 Identities = 182/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 101217 ATTTTTATTTAATATACTAGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAG 101276 ||| |||| || ||| ||||||||||| ||||| | ||| | || | ||| || |||| Sbjct 3564 ATTATTATAGAAAATATTAGACATTTCCGCCTCTAAGACGGAGTACAAGATGTAGTGTAG 3623 Query 101277 ATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAA 101336 ||||||| || ||||| ||||| | | ||| | | || || | ||||| || || | Sbjct 3624 ATTCTTTCTGAATATTATAATCTGACAAAGTACGTCCGTCCTCGAGCTGCTTGCCCGCGA 3683 Query 101337 ATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAA 101396 | |||| | || ||||| || |||||||| ||||| ||||||||||| |||||| Sbjct 3684 AAATCAGTCTTTGCTGATCAGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTTACAT 3743 Query 101397 TTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTA 101456 | || | || || || | || || || | ||||| ||||| || || |||||||| | Sbjct 3744 TCTCGATCGTATCCGAAGCCTCTACCTCCAAAGTGATAGTTTTTCCTGTCAAAGTTTTGA 3803 Query 101457 CAAATATCTGCAT 101469 | || || ||||| Sbjct 3804 CGAAAATTTGCAT 3816 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||||||||| || |||||||| || || ||||||||||| | | || | |||| || Sbjct 3835 AACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCTTC 3894 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||| || || ||||| ||||| | ||||||||| || || ||||||||||| || || Sbjct 3895 AAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCTTTGTCCTG 3954 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| ||| ||| |||| | || || || | || ||||| | |||| || || Sbjct 3955 AATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTGATGGTCTT 4014 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | ||| || || || |||||||| Sbjct 4015 ACCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||| | ||||||||| | || ||||| || || ||||||||||| | Sbjct 4046 CCACCACGTAGACGAAGAACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCAGAA 4105 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||| || |||||||| ||||| | ||| ||||| || || Sbjct 4106 AGCGTGCGACCATCTTCGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGG 4165 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||| |||||||| ||| ||| | |||| || ||||| | || ||| Sbjct 4166 ATACCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCGACT 4225 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| ||||| ||||| | ||| || || || |||||||| Sbjct 4226 TCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4272 >seq1592 Length=29089 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || ||||||||||| || || ||||| ||||| ||||||||||||| | || | | Sbjct 199 CGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGTCCG 258 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||| ||||| || || || ||||| | ||| ||||| || || ||||||||||| Sbjct 259 TCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTG 318 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 ||||||||||| ||| ||| | || | || || || | || ||||| | ||| | Sbjct 319 TCTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGTAATA 378 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || || || ||||| Sbjct 379 GTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | ||| | | ||| | ||| || || ||||| || || ||||||||||||| Sbjct 641 TTCCGCCACGTAATCTGAGAACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGG 700 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | | || || | || || || || || ||||| ||||| || || || | Sbjct 701 ACAAGGTACGTCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTG 760 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||| || ||||| || ||||| | || | ||||||||| | ||| | Sbjct 761 GAATACCCTCTTTGTCCTGAATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAA 820 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 |||| ||||| | ||||| || ||||| || || ||||| ||||||||||| Sbjct 821 CTTCGAGAGTTATAGTTTTTCCAGTTAATGTCTTCACAAAAATCTGCATGGT 872 Score = 120 bits (132), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 101285 TGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAA 101344 || ||||||||||||| | || | | || |||| ||||| || || || ||||| Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 101345 CGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACA 101404 | ||| ||||| || |||||||||||||| ||||||||||| ||| ||| | || | Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATC 120 Query 101405 GTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATC 101464 || ||||| | || ||||| | |||| ||||| ||||| | ||| || || || ||| Sbjct 121 GTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATC 180 Query 101465 TGCATGGTTACGCGAAGATTTGTAAAACTA 101494 ||||| | ||||||| | | ||||||| Sbjct 181 TGCATACCTCCGCGAAG--TCGCAAAACTA 208 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||| | ||| || || | || || ||||| || || ||||| |||| Sbjct 415 CCACCACGTAGACGAAGAACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCGGAA 474 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | || || || ||||| ||||| | || ||||| || || Sbjct 475 AGCGTGCGGCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGGGG 534 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||| |||||||| ||| ||| | || | ||||| || | ||| || Sbjct 535 ATGCCTTCTTTATCCTGAATTTTCGCTTTGACATTCTCGATCGTGTCTGAAGCTTCAACC 594 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || || ||||| ||||| |||||||| Sbjct 595 TCCAATGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATCTGCAT 641 >seq121 Length=74473 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 ||||||| || || ||||| | || ||| | |||| |||| || || || ||||| | Sbjct 8121 CTTTTTGGATGTTATAATCAGAGAGAGTACGTCCATCTTCCAGCTGTTTTCCAGCAAAGA 8180 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | ||||| ||||| || ||||| || |||||||| ||||| || ||| ||| ||| Sbjct 8181 TAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATCTTGGCTTTCACATTTT 8240 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | || ||||| | ||| || || ||||| | ||||| || || | ||||| || | Sbjct 8241 CGATGGTATCAGAGGCTTCTACCTCGAGAGTAATGGTTTTACCAGTGAGGGTTTTGACGA 8300 Query 101460 ATATCTGCATGGT 101472 | ||||||||||| Sbjct 8301 AAATCTGCATGGT 8313 >seq1483 Length=30179 Score = 93.3 bits (102), Expect = 3e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| || || | || || || | |||||||||||| || |||||||| |||| Sbjct 23249 CCACCTCGCAAGCGCAGTACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAGTCGGAT 23308 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| || |||| ||||||||||| || ||||| ||||| | || ||||| |||||| Sbjct 23309 AAAGTCCTACCATCTTCCAATTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGCGGA 23368 Query 101363 ATGCCT 101368 || ||| Sbjct 23369 ATTCCT 23374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396100649819028