Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq509 145 1e-29 >seq509 Length=47779 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 197067 GTACATCTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCT 197126 |||| || ||| || ||| |||||| || | | ||| | ||||| || || ||||| Sbjct 35631 GTACTCCTCGTTTTCCTGATCGTAACAAGCCAAAAGGAAGCCACCGTAAGTGCCTGTTCT 35690 Query 197127 CTTTCCCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTC 197186 |||||| ||| || | || ||||| || |||| ||| || || |||| ||| || || Sbjct 35691 CTTTCCTTTGCCGATGTAACCACCGATTACAACCACATCGAGCGTATCGCCCACGCCGTC 35750 Query 197187 CATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGC 197246 || ||||||||| ||||| || | |||| |||| |||| ||| || ||||| |||||||| Sbjct 35751 CAAGTAATCTTTTTTCAGCTTCAACCAGTTTCTCGATCGCTTCGCGATCTCATAGGTTGC 35810 Query 197247 GTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCTTCAC 197294 | | ||||| ||||| | ||| | |||||||||| | ||||||| Sbjct 35811 ATCCTCCTCCAGCGTCTTCACCATTAGACCCTCGCAATTTCCCTTCAC 35858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676418270547520