Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq31281 86.0 1e-11 seq1084 84.2 4e-11 >seq31281 Length=738 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||||| || ||||||| ||||||||||| ||||||| ||||| Sbjct 499 TGATGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTC 558 Query 133019 AAATCCCTCCCCCGC 133033 ||||| ||||||| Sbjct 559 GAATCCTGCCCCCGC 573 >seq1084 Length=35175 Score = 84.2 bits (92), Expect = 4e-11 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 68695 TGGGGC-ATAGCTCAGG-GGTTAGAGCGCGCGCTTGATAAGCGTGAGGCCGTTGGTTCGA 68752 |||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||| | Sbjct 6158 TGGGGCTATAGCTCAGCAGGTTAGAGCGCACGCTTGATAAGCGTGAGGTCGTTGGTTCAA 6217 Query 68753 GACCAACTGTCCCTACCA 68770 | |||| | ||| |||| Sbjct 6218 GTCCAATTAGCCCCACCA 6235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895354302667680